Smorodina E - Search Results

1

Computational engineering of water-soluble human potassium ion channels through QTY transformation.

Smorodina E, Tao F, Qing R, Yang S, Zhang S. Smorodina E, et al. Sci Rep. 2024 Nov 15;14(1):28159. doi: 10.1038/s41598-024-76603-7. Sci Rep. 2024. PMID: 39548172 Free PMC article.

2

Assessing AF2's ability to predict structural ensembles of proteins.

Riccabona JR, Spoendlin FC, Fischer AM, Loeffler JR, Quoika PK, Jenkins TP, Ferguson JA, Smorodina E, Laustsen AH, Greiff V, Forli S, Ward AB, Deane CM, Fernández-Quintero ML. Riccabona JR, et al. Among authors: smorodina e. Structure. 2024 Nov 7;32(11):2147-2159.e2. doi: 10.1016/j.str.2024.09.001. Epub 2024 Sep 26. Structure. 2024. PMID: 39332396

3

Biophysical cartography of the native and human-engineered antibody landscapes quantifies the plasticity of antibody developability.

Bashour H, Smorodina E, Pariset M, Zhong J, Akbar R, Chernigovskaya M, Lê Quý K, Snapkow I, Rawat P, Krawczyk K, Sandve GK, Gutierrez-Marcos J, Gutierrez DN, Andersen JT, Greiff V. Bashour H, et al. Among authors: smorodina e. Commun Biol. 2024 Jul 31;7(1):922. doi: 10.1038/s42003-024-06561-3. Commun Biol. 2024. PMID: 39085379 Free PMC article.

4

Structural bioinformatics studies of glutamate transporters and their AlphaFold2 predicted water-soluble QTY variants and uncovering the natural mutations of L->Q, I->T, F->Y and Q->L, T->I and Y->F.

Karagöl A, Karagöl T, Smorodina E, Zhang S. Karagöl A, et al. Among authors: smorodina e. PLoS One. 2024 Apr 10;19(4):e0289644. doi: 10.1371/journal.pone.0289644. eCollection 2024. PLoS One. 2024. PMID: 38598436 Free PMC article.

5

Structural bioinformatics studies of six human ABC transporters and their AlphaFold2-predicted water-soluble QTY variants.

Pan E, Tao F, Smorodina E, Zhang S. Pan E, et al. Among authors: smorodina e. QRB Discov. 2024 Jan 19;5:e1. doi: 10.1017/qrd.2024.2. eCollection 2024. QRB Discov. 2024. PMID: 38577032 Free PMC article.

6

Corrigendum: Experimental validation of immunogenic SARS-CoV-2 T cell epitopes identified by artificial intelligence.

Federico L, Malone B, Tennøe S, Chaban V, Osen JR, Gainullin M, Smorodina E, Kared H, Akbar R, Greiff V, Stratford R, Clancy T, Munthe LA. Federico L, et al. Among authors: smorodina e. Front Immunol. 2024 Feb 21;15:1377041. doi: 10.3389/fimmu.2024.1377041. eCollection 2024. Front Immunol. 2024. PMID: 38449865 Free PMC article.

7

Experimental validation of immunogenic SARS-CoV-2 T cell epitopes identified by artificial intelligence.

Federico L, Malone B, Tennøe S, Chaban V, Osen JR, Gainullin M, Smorodina E, Kared H, Akbar R, Greiff V, Stratford R, Clancy T, Munthe LA. Federico L, et al. Among authors: smorodina e. Front Immunol. 2023 Nov 17;14:1265044. doi: 10.3389/fimmu.2023.1265044. eCollection 2023. Front Immunol. 2023. PMID: 38045681 Free PMC article.

8

Effects of ion type and concentration on the structure and aggregation of the amyloid peptide A

β_{16 - 22}

.

Smorodina E, Kav B, Fatafta H, Strodel B. Smorodina E, et al. Proteins. 2023 Nov 14. doi: 10.1002/prot.26635. Online ahead of print. Proteins. 2023. PMID: 37964477

9

Structural bioinformatics studies of bacterial outer membrane beta-barrel transporters and their AlphaFold2 predicted water-soluble QTY variants.

Sajeev-Sheeja A, Smorodina E, Zhang S. Sajeev-Sheeja A, et al. Among authors: smorodina e. PLoS One. 2023 Aug 22;18(8):e0290360. doi: 10.1371/journal.pone.0290360. eCollection 2023. PLoS One. 2023. PMID: 37607179 Free PMC article.

10

Erratum: Comparing 2 crystal structures and 12 AlphaFold2-predicted human membrane glucose transporters and their water-soluble glutamine, threonine and tyrosine variants - CORRIGENDUM.

Smorodina E, Tao F, Qing R, Jin D, Yang S, Zhang S. Smorodina E, et al. QRB Discov. 2022 Jul 21;3:e8. doi: 10.1017/qrd.2022.8. eCollection 2022. QRB Discov. 2022. PMID: 37529291 Free PMC article.

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