McWeeney SK - Search Results

1

Targeting CCL2/CCR2 Signaling Overcomes MEK Inhibitor Resistance in Acute Myeloid Leukemia.

Modak RV, de Oliveira Rebola KG, McClatchy J, Mohammadhosseini M, Damnernsawad A, Kurtz SE, Eide CA, Wu G, Laderas T, Nechiporuk T, Gritsenko MA, Hansen JR, Hutchinson C, Gosline SJC, Piehowski P, Bottomly D, Short N, Rodland K, McWeeney SK, Tyner JW, Agarwal A. Modak RV, et al. Among authors: mcweeney sk. Clin Cancer Res. 2024 May 15;30(10):2245-2259. doi: 10.1158/1078-0432.CCR-23-2654. Clin Cancer Res. 2024. PMID: 38451486 Free PMC article.

2

Consensus framework for exploring microarray data using multiple clustering methods.

Laderas T, McWeeney S. Laderas T, et al. OMICS. 2007 Spring;11(1):116-28. doi: 10.1089/omi.2006.0008. OMICS. 2007. PMID: 17411399

3

TandTRAQ: an open-source tool for integrated protein identification and quantitation.

Laderas T, Bystrom C, McMillen D, Fan G, McWeeney S. Laderas T, et al. Bioinformatics. 2007 Dec 15;23(24):3394-6. doi: 10.1093/bioinformatics/btm467. Epub 2007 Sep 25. Bioinformatics. 2007. PMID: 17895273

4

High throughput sequencing in mice: a platform comparison identifies a preponderance of cryptic SNPs.

Walter NA, Bottomly D, Laderas T, Mooney MA, Darakjian P, Searles RP, Harrington CA, McWeeney SK, Hitzemann R, Buck KJ. Walter NA, et al. Among authors: mcweeney sk. BMC Genomics. 2009 Aug 17;10:379. doi: 10.1186/1471-2164-10-379. BMC Genomics. 2009. PMID: 19686600 Free PMC article.

5

Identification of {beta}-catenin binding regions in colon cancer cells using ChIP-Seq.

Bottomly D, Kyler SL, McWeeney SK, Yochum GS. Bottomly D, et al. Among authors: mcweeney sk. Nucleic Acids Res. 2010 Sep;38(17):5735-45. doi: 10.1093/nar/gkq363. Epub 2010 May 11. Nucleic Acids Res. 2010. PMID: 20460455 Free PMC article.

6

A viral microRNA down-regulates multiple cell cycle genes through mRNA 5'UTRs.

Grey F, Tirabassi R, Meyers H, Wu G, McWeeney S, Hook L, Nelson JA. Grey F, et al. PLoS Pathog. 2010 Jun 24;6(6):e1000967. doi: 10.1371/journal.ppat.1000967. PLoS Pathog. 2010. PMID: 20585629 Free PMC article.

7

Evaluating gene expression in C57BL/6J and DBA/2J mouse striatum using RNA-Seq and microarrays.

Bottomly D, Walter NA, Hunter JE, Darakjian P, Kawane S, Buck KJ, Searles RP, Mooney M, McWeeney SK, Hitzemann R. Bottomly D, et al. Among authors: mcweeney sk. PLoS One. 2011 Mar 24;6(3):e17820. doi: 10.1371/journal.pone.0017820. PLoS One. 2011. PMID: 21455293 Free PMC article.

8

Computational detection of alternative exon usage.

Laderas TG, Walter NA, Mooney M, Vartanian K, Darakjian P, Buck K, Harrington CA, Belknap J, Hitzemann R, McWeeney SK. Laderas TG, et al. Among authors: mcweeney sk. Front Neurosci. 2011 May 13;5:69. doi: 10.3389/fnins.2011.00069. eCollection 2011. Front Neurosci. 2011. PMID: 21625610 Free PMC article.

9

Utilizing RNA-Seq data for de novo coexpression network inference.

Iancu OD, Kawane S, Bottomly D, Searles R, Hitzemann R, McWeeney S. Iancu OD, et al. Bioinformatics. 2012 Jun 15;28(12):1592-7. doi: 10.1093/bioinformatics/bts245. Epub 2012 May 3. Bioinformatics. 2012. PMID: 22556371 Free PMC article.

10

Detection of expression quantitative trait Loci in complex mouse crosses: impact and alleviation of data quality and complex population substructure.

Iancu OD, Darakjian P, Kawane S, Bottomly D, Hitzemann R, McWeeney S. Iancu OD, et al. Front Genet. 2012 Aug 27;3:157. doi: 10.3389/fgene.2012.00157. eCollection 2012. Front Genet. 2012. PMID: 22969789 Free PMC article.

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