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Page 1
Epigenetic Reprogramming of Autophagy Drives Mutant IDH1 Glioma Progression and Response to Radiation.
Núñez FJ, Banerjee K, Mujeeb AA, Mauser A, Tronrud CE, Zhu Z, Taher A, Kadiyala P, Carney SV, Garcia-Fabiani MB, Comba A, Alghamri MS, McClellan BL, Faisal SM, Nwosu ZC, Hong HS, Qin T, Sartor MA, Ljungman M, Cheng SY, Appelman HD, Lowenstein PR, Lahann J, Lyssiotis CA, Castro MG. Núñez FJ, et al. Among authors: ljungman m. bioRxiv [Preprint]. 2024 Mar 13:2024.03.08.584091. doi: 10.1101/2024.03.08.584091. bioRxiv. 2024. PMID: 38559270 Free PMC article. Preprint.
Cdc73 protects Notch-induced T-cell leukemia cells from DNA damage and mitochondrial stress.
Melnick A, Liang S, Liu Y, Wang Q, Dean N, Choe E, Kunnath N, Bodanapu G, Mullin C, Akter F, Lin K, Magnuson B, Kumar S, Lombard DB, Muntean AG, Ljungman M, Sekiguchi J, Ryan RJH, Chiang MY. Melnick A, et al. Among authors: ljungman m. bioRxiv [Preprint]. 2023 Feb 4:2023.01.22.525059. doi: 10.1101/2023.01.22.525059. bioRxiv. 2023. Update in: Blood. 2023 Dec 21;142(25):2159-2174. doi: 10.1182/blood.2023020144 PMID: 36711472 Free PMC article. Updated. Preprint.
The ENCODE4 long-read RNA-seq collection reveals distinct classes of transcript structure diversity.
Reese F, Williams B, Balderrama-Gutierrez G, Wyman D, Çelik MH, Rebboah E, Rezaie N, Trout D, Razavi-Mohseni M, Jiang Y, Borsari B, Morabito S, Liang HY, McGill CJ, Rahmanian S, Sakr J, Jiang S, Zeng W, Carvalho K, Weimer AK, Dionne LA, McShane A, Bedi K, Elhajjajy SI, Upchurch S, Jou J, Youngworth I, Gabdank I, Sud P, Jolanki O, Strattan JS, Kagda MS, Snyder MP, Hitz BC, Moore JE, Weng Z, Bennett D, Reinholdt L, Ljungman M, Beer MA, Gerstein MB, Pachter L, Guigó R, Wold BJ, Mortazavi A. Reese F, et al. Among authors: ljungman m. bioRxiv [Preprint]. 2023 May 16:2023.05.15.540865. doi: 10.1101/2023.05.15.540865. bioRxiv. 2023. PMID: 37292896 Free PMC article. Preprint.
STK19 facilitates the clearance of lesion-stalled RNAPII during transcription-coupled DNA repair.
van den Heuvel D, Rodríguez-Martínez M, van der Meer PJ, Moreno NN, Park J, Kim HS, van Schie JJM, Wondergem AP, D'Souza A, Yakoub G, Herlihy AE, Kashyap K, Boissière T, Walker J, Mitter R, Apelt K, de Lint K, Kirdök I, Ljungman M, Wolthuis RMF, Cramer P, Schärer OD, Kokic G, Svejstrup JQ, Luijsterburg MS. van den Heuvel D, et al. Among authors: ljungman m. bioRxiv [Preprint]. 2024 Jul 22:2024.07.22.604575. doi: 10.1101/2024.07.22.604575. bioRxiv. 2024. Update in: Cell. 2024 Dec 12;187(25):7107-7125.e25. doi: 10.1016/j.cell.2024.10.018 PMID: 39091731 Free PMC article. Updated. Preprint.
STK19 facilitates the clearance of lesion-stalled RNAPII during transcription-coupled DNA repair.
van den Heuvel D, Rodríguez-Martínez M, van der Meer PJ, Nieto Moreno N, Park J, Kim HS, van Schie JJM, Wondergem AP, D'Souza A, Yakoub G, Herlihy AE, Kashyap K, Boissière T, Walker J, Mitter R, Apelt K, de Lint K, Kirdök I, Ljungman M, Wolthuis RMF, Cramer P, Schärer OD, Kokic G, Svejstrup JQ, Luijsterburg MS. van den Heuvel D, et al. Among authors: ljungman m. Cell. 2024 Dec 12;187(25):7107-7125.e25. doi: 10.1016/j.cell.2024.10.018. Epub 2024 Nov 14. Cell. 2024. PMID: 39547229 Free article.
Ascitic Shear Stress Activates GPCRs and Downregulates Mucin 15 to Promote OvarianCancer Malignancy.
Mehta G, Horst E, Cotter L, Bonini M, Novak C, Treacher N, Zhang Y, Jackson Z, Narayanan IV, Wuchu F, Nenwani M, Fischer Z, Sunshine A, Lin Z, Tran L, Nagrath D, Ljungman M, Maturen K, DiFeo A, Nordsletten D. Mehta G, et al. Among authors: ljungman m. Res Sq [Preprint]. 2024 Nov 25:rs.3.rs-5160301. doi: 10.21203/rs.3.rs-5160301/v1. Res Sq. 2024. PMID: 39483899 Free PMC article. Preprint.
PHF6 cooperates with SWI/SNF complexes to facilitate transcriptional progression.
Mittal P, Myers JA, Carter RD, Radko-Juettner S, Malone HA, Rosikiewicz W, Robertson AN, Zhu Z, Narayanan IV, Hansen BS, Parrish M, Bhanu NV, Mobley RJ, Rehg JE, Xu B, Drosos Y, Pruett-Miller SM, Ljungman M, Garcia BA, Wu G, Partridge JF, Roberts CWM. Mittal P, et al. Among authors: ljungman m. Nat Commun. 2024 Aug 24;15(1):7303. doi: 10.1038/s41467-024-51566-5. Nat Commun. 2024. PMID: 39181868 Free PMC article.
BRD4-mediated epigenetic regulation of endoplasmic reticulum-mitochondria contact sites is governed by the mitochondrial complex III.
Chen B, Stark DC, Jadhav PV, Lynn-Nguyen TM, Halligan BS, Rossiter NJ, Sindoni N, Shin M, Paulo JA, Chang M, Koo I, Koshkin S, Eyunni S, Ronchi P, Paulsen MT, Morlacchi P, Hanna DA, Lin J, Guerra RM, Pagliarini DJ, Banerjee R, Parolia A, Ljungman ME, Patterson AD, Mancias JD, Mosalaganti S, Sexton JZ, Calì T, Lyssiotis CA, Shah YM. Chen B, et al. Among authors: ljungman me. bioRxiv [Preprint]. 2024 Nov 5:2024.02.02.578646. doi: 10.1101/2024.02.02.578646. bioRxiv. 2024. PMID: 38352460 Free PMC article. Preprint.
192 results