Yousef M - Search Results

1

Yousef M, Allmer J. Yousef M, et al. Turk J Biol. 2023 Dec 18;47(6):366-382. doi: 10.55730/1300-0152.2671. eCollection 2023. Turk J Biol. 2023. PMID: 38681776 Free PMC article.

2

maTE: discovering expressed interactions between microRNAs and their targets.

Yousef M, Abdallah L, Allmer J. Yousef M, et al. Bioinformatics. 2019 Oct 15;35(20):4020-4028. doi: 10.1093/bioinformatics/btz204. Bioinformatics. 2019. PMID: 30895309

3

Ensemble Classifiers for Multiclass MicroRNA Classification.

Odenthal L, Allmer J, Yousef M. Odenthal L, et al. Among authors: yousef m. Methods Mol Biol. 2022;2257:235-254. doi: 10.1007/978-1-0716-1170-8_12. Methods Mol Biol. 2022. PMID: 34432282

4

PriPath: identifying dysregulated pathways from differential gene expression via grouping, scoring, and modeling with an embedded feature selection approach.

Yousef M, Ozdemir F, Jaber A, Allmer J, Bakir-Gungor B. Yousef M, et al. BMC Bioinformatics. 2023 Feb 23;24(1):60. doi: 10.1186/s12859-023-05187-2. BMC Bioinformatics. 2023. PMID: 36823571 Free PMC article.

5

MicroRNA categorization using sequence motifs and k-mers.

Yousef M, Khalifa W, Acar İE, Allmer J. Yousef M, et al. BMC Bioinformatics. 2017 Mar 14;18(1):170. doi: 10.1186/s12859-017-1584-1. BMC Bioinformatics. 2017. PMID: 28292266 Free PMC article.

6

Computational Prediction of Functional MicroRNA-mRNA Interactions.

Saçar Demirci MD, Yousef M, Allmer J. Saçar Demirci MD, et al. Among authors: yousef m. Methods Mol Biol. 2019;1912:175-196. doi: 10.1007/978-1-4939-8982-9_7. Methods Mol Biol. 2019. PMID: 30635894

7

44 Current Challenges in miRNomics.

Akgül B, Stadler PF, Hawkins LJ, Hadj-Moussa H, Storey KB, Ergin K, Çetinkaya R, Paschoal AR, Nachtigall PG, Tutar Y, Yousef M, Allmer J. Akgül B, et al. Among authors: yousef m. Methods Mol Biol. 2022;2257:423-438. doi: 10.1007/978-1-0716-1170-8_19. Methods Mol Biol. 2022. PMID: 34432289

8

Intersection of MicroRNA and gene regulatory networks and their implication in cancer.

Yousef M, Trinh HV, Allmer J. Yousef M, et al. Curr Pharm Biotechnol. 2014;15(5):445-54. doi: 10.2174/1389201015666140519120855. Curr Pharm Biotechnol. 2014. PMID: 24846065 Review.

9

Feature Selection Has a Large Impact on One-Class Classification Accuracy for MicroRNAs in Plants.

Yousef M, Saçar Demirci MD, Khalifa W, Allmer J. Yousef M, et al. Adv Bioinformatics. 2016;2016:5670851. doi: 10.1155/2016/5670851. Epub 2016 Apr 12. Adv Bioinformatics. 2016. PMID: 27190509 Free PMC article.

10

The impact of feature selection on one and two-class classification performance for plant microRNAs.

Khalifa W, Yousef M, Saçar Demirci MD, Allmer J. Khalifa W, et al. Among authors: yousef m. PeerJ. 2016 Jun 21;4:e2135. doi: 10.7717/peerj.2135. eCollection 2016. PeerJ. 2016. PMID: 27366641 Free PMC article.

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