Zhang Y - Search Results

1

A novel hypergraph model for identifying and prioritizing personalized drivers in cancer.

Zhang N, Ma F, Guo D, Pang Y, Wang C, Zhang Y, Zheng X, Wang M. Zhang N, et al. Among authors: zhang y. PLoS Comput Biol. 2024 Apr 29;20(4):e1012068. doi: 10.1371/journal.pcbi.1012068. eCollection 2024 Apr. PLoS Comput Biol. 2024. PMID: 38683860 Free PMC article.

2

QIMCMDA: MiRNA-Disease Association Prediction by q-Kernel Information and Matrix Completion.

Wang L, Chen Y, Zhang N, Chen W, Zhang Y, Gao R. Wang L, et al. Among authors: zhang n, zhang y. Front Genet. 2020 Oct 22;11:594796. doi: 10.3389/fgene.2020.594796. eCollection 2020. Front Genet. 2020. PMID: 33193744 Free PMC article.

3

Protein-Protein Interaction Prediction Based on Spectral Radius and General Regression Neural Network.

Xu H, Xu D, Zhang N, Zhang Y, Gao R. Xu H, et al. Among authors: zhang n, zhang y. J Proteome Res. 2021 Mar 5;20(3):1657-1665. doi: 10.1021/acs.jproteome.0c00871. Epub 2021 Feb 8. J Proteome Res. 2021. PMID: 33555893

4

MDAKRLS: Predicting human microbe-disease association based on Kronecker regularized least squares and similarities.

Xu D, Xu H, Zhang Y, Wang M, Chen W, Gao R. Xu D, et al. Among authors: zhang y. J Transl Med. 2021 Feb 12;19(1):66. doi: 10.1186/s12967-021-02732-6. J Transl Med. 2021. PMID: 33579301 Free PMC article.

5

DriverRWH: discovering cancer driver genes by random walk on a gene mutation hypergraph.

Wang C, Shi J, Cai J, Zhang Y, Zheng X, Zhang N. Wang C, et al. Among authors: zhang n, zhang y. BMC Bioinformatics. 2022 Jul 13;23(1):277. doi: 10.1186/s12859-022-04788-7. BMC Bioinformatics. 2022. PMID: 35831792 Free PMC article.

6

MaxCLK: discovery of cancer driver genes via maximal clique and information entropy of modules.

Liu J, Ma F, Zhu Y, Zhang N, Kong L, Mi J, Cong H, Gao R, Wang M, Zhang Y. Liu J, et al. Among authors: zhang n, zhang y. Bioinformatics. 2023 Dec 1;39(12):btad737. doi: 10.1093/bioinformatics/btad737. Bioinformatics. 2023. PMID: 38065693 Free PMC article.

7

GSRF-DTI: a framework for drug-target interaction prediction based on a drug-target pair network and representation learning on a large graph.

Zhu Y, Ning C, Zhang N, Wang M, Zhang Y. Zhu Y, et al. Among authors: zhang n, zhang y. BMC Biol. 2024 Jul 18;22(1):156. doi: 10.1186/s12915-024-01949-3. BMC Biol. 2024. PMID: 39020316 Free PMC article.

8

SCSMD: Single Cell Consistent Clustering based on Spectral Matrix Decomposition.

Jia R, Ren YZ, Li PN, Gao R, Zhang YS. Jia R, et al. Brief Bioinform. 2024 May 23;25(4):bbae273. doi: 10.1093/bib/bbae273. Brief Bioinform. 2024. PMID: 38855914 Free PMC article.

9

A novel model for DNA sequence similarity analysis based on graph theory.

Qi X, Wu Q, Zhang Y, Fuller E, Zhang CQ. Qi X, et al. Among authors: zhang cq, zhang y. Evol Bioinform Online. 2011;7:149-58. doi: 10.4137/EBO.S7364. Epub 2011 Oct 4. Evol Bioinform Online. 2011. PMID: 22065497 Free PMC article.

10

A novel model for protein sequence similarity analysis based on spectral radius.

Wu C, Gao R, De Marinis Y, Zhang Y. Wu C, et al. Among authors: zhang y. J Theor Biol. 2018 Jun 7;446:61-70. doi: 10.1016/j.jtbi.2018.03.001. Epub 2018 Mar 7. J Theor Biol. 2018. PMID: 29524440 Free PMC article.

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