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A survey of k-mer methods and applications in bioinformatics.
Moeckel C, Mareboina M, Konnaris MA, Chan CSY, Mouratidis I, Montgomery A, Chantzi N, Pavlopoulos GA, Georgakopoulos-Soares I. Moeckel C, et al. Among authors: montgomery a. Comput Struct Biotechnol J. 2024 May 21;23:2289-2303. doi: 10.1016/j.csbj.2024.05.025. eCollection 2024 Dec. Comput Struct Biotechnol J. 2024. PMID: 38840832 Free PMC article. Review.
The determinants of the rarity of nucleic and peptide short sequences in nature.
Chantzi N, Mareboina M, Konnaris MA, Montgomery A, Patsakis M, Mouratidis I, Georgakopoulos-Soares I. Chantzi N, et al. Among authors: montgomery a. NAR Genom Bioinform. 2024 Apr 4;6(2):lqae029. doi: 10.1093/nargab/lqae029. eCollection 2024 Jun. NAR Genom Bioinform. 2024. PMID: 38584871 Free PMC article.
Utilizing nullomers in cell-free RNA for early cancer detection.
Montgomery A, Tsiatsianis GC, Mouratidis I, Chan CSY, Athanasiou M, Papanastasiou AD, Kantere V, Syrigos N, Vathiotis I, Syrigos K, Yee NS, Georgakopoulos-Soares I. Montgomery A, et al. Cancer Gene Ther. 2024 Jun;31(6):861-870. doi: 10.1038/s41417-024-00741-3. Epub 2024 Feb 14. Cancer Gene Ther. 2024. PMID: 38351138 Free PMC article.
kmerDB: A database encompassing the set of genomic and proteomic sequence information for each species.
Mouratidis I, Baltoumas FA, Chantzi N, Patsakis M, Chan CSY, Montgomery A, Konnaris MA, Aplakidou E, Georgakopoulos GC, Das A, Chartoumpekis DV, Kovac J, Pavlopoulos GA, Georgakopoulos-Soares I. Mouratidis I, et al. Among authors: montgomery a. Comput Struct Biotechnol J. 2024 Apr 21;23:1919-1928. doi: 10.1016/j.csbj.2024.04.050. eCollection 2024 Dec. Comput Struct Biotechnol J. 2024. PMID: 38711760 Free PMC article.
The clinical and cost effectiveness of a STAndardised DIagnostic Assessment for children and adolescents with emotional difficulties: the STADIA multi-centre randomised controlled trial.
Sayal K, Wyatt L, Partlett C, Ewart C, Bhardwaj A, Dubicka B, Marshall T, Gledhill J, Lang A, Sprange K, Thomson L, Moody S, Holt G, Bould H, Upton C, Keane M, Cox E, James M, Montgomery A. Sayal K, et al. Among authors: montgomery a. J Child Psychol Psychiatry. 2025 Jan 7. doi: 10.1111/jcpp.14090. Online ahead of print. J Child Psychol Psychiatry. 2025. PMID: 39775729
Identification of the shortest species-specific oligonucleotide sequences.
Mouratidis I, Konnaris M, Chantzi N, Chan CSY, Patsakis M, Provatas K, Montgomery A, Baltoumas FA, Sha CM, Mareboina M, Pavlopoulos GA, Chartoumpekis DV, Georgakopoulos-Soares I. Mouratidis I, et al. Among authors: montgomery a. Genome Res. 2025 Jan 2:gr.280070.124. doi: 10.1101/gr.280070.124. Online ahead of print. Genome Res. 2025. PMID: 39746719 Free article.
1,332 results