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The protein universe in 3D.
Ellmen I, Raybould MIJ, Deane CM. Ellmen I, et al. Among authors: deane cm. Nat Chem Biol. 2025 Jan;21(1):27-28. doi: 10.1038/s41589-024-01800-4. Nat Chem Biol. 2025. PMID: 39719497 No abstract available.
Large scale paired antibody language models.
Kenlay H, Dreyer FA, Kovaltsuk A, Miketa D, Pires D, Deane CM. Kenlay H, et al. Among authors: deane cm. PLoS Comput Biol. 2024 Dec 6;20(12):e1012646. doi: 10.1371/journal.pcbi.1012646. eCollection 2024 Dec. PLoS Comput Biol. 2024. PMID: 39642174 Free PMC article.
p-IgGen: a paired antibody generative language model.
Turnbull OM, Oglic D, Croasdale-Wood R, Deane CM. Turnbull OM, et al. Among authors: deane cm. Bioinformatics. 2024 Nov 1;40(11):btae659. doi: 10.1093/bioinformatics/btae659. Bioinformatics. 2024. PMID: 39520401 Free PMC article.
AIntibody: an experimentally validated in silico antibody discovery design challenge.
Erasmus MF, Spector L, Ferrara F, DiNiro R, Pohl TJ, Perea-Schmittle K, Wang W, Tessier PM, Richardson C, Turner L, Kumar S, Bedinger D, Sormanni P, Fernández-Quintero ML, Ward AB, Loeffler JR, Swanson OM, Deane CM, Raybould MIJ, Evers A, Sellmann C, Bachas S, Ruffolo J, Nastri HG, Ramesh K, Sørensen J, Croasdale-Wood R, Hijano O, Leal-Lopes C, Shahsavarian M, Qiu Y, Marcatili P, Vernet E, Akbar R, Friedensohn S, Wagner R, Kurella VB, Malhotra S, Kumar S, Kidger P, Almagro JC, Furfine E, Stanton M, Graff CP, Villalba SD, Tomszak F, Teixeira AAR, Hopkins E, Dovner M, D'Angelo S, Bradbury ARM. Erasmus MF, et al. Among authors: deane cm. Nat Biotechnol. 2024 Nov;42(11):1637-1642. doi: 10.1038/s41587-024-02469-9. Nat Biotechnol. 2024. PMID: 39496931 No abstract available.
439 results