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APIR: Aggregating Universal Proteomics Database Search Algorithms for Peptide Identification with FDR Control.
Genomics Proteomics Bioinformatics. 2024 Jul 3;22(2):qzae042. doi: 10.1093/gpbjnl/qzae042.
Genomics Proteomics Bioinformatics. 2024.
PMID: 39198030
Free article.
Multi-sample non-negative spatial factorization.
Wang Y, Woyshner K, Sriworarat C, Stein-O'Brien G, Goff LA, Hansen KD.
Wang Y, et al. Among authors: woyshner k.
bioRxiv [Preprint]. 2024 Nov 27:2024.07.01.599554. doi: 10.1101/2024.07.01.599554.
bioRxiv. 2024.
PMID: 39005356
Free PMC article.
Preprint.
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Clipper: p-value-free FDR control on high-throughput data from two conditions.
Ge X, Chen YE, Song D, McDermott M, Woyshner K, Manousopoulou A, Wang N, Li W, Wang LD, Li JJ.
Ge X, et al. Among authors: woyshner k.
Genome Biol. 2021 Oct 11;22(1):288. doi: 10.1186/s13059-021-02506-9.
Genome Biol. 2021.
PMID: 34635147
Free PMC article.
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