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Single-fly genome assemblies fill major phylogenomic gaps across the Drosophilidae Tree of Life.
Kim BY, Gellert HR, Church SH, Suvorov A, Anderson SS, Barmina O, Beskid SG, Comeault AA, Crown KN, Diamond SE, Dorus S, Fujichika T, Hemker JA, Hrcek J, Kankare M, Katoh T, Magnacca KN, Martin RA, Matsunaga T, Medeiros MJ, Miller DE, Pitnick S, Schiffer M, Simoni S, Steenwinkel TE, Syed ZA, Takahashi A, Wei KH, Yokoyama T, Eisen MB, Kopp A, Matute D, Obbard DJ, O'Grady PM, Price DK, Toda MJ, Werner T, Petrov DA. Kim BY, et al. Among authors: toda mj. PLoS Biol. 2024 Jul 18;22(7):e3002697. doi: 10.1371/journal.pbio.3002697. eCollection 2024 Jul. PLoS Biol. 2024. PMID: 39024225 Free PMC article.
Highly contiguous assemblies of 101 drosophilid genomes.
Kim BY, Wang JR, Miller DE, Barmina O, Delaney E, Thompson A, Comeault AA, Peede D, D'Agostino ERR, Pelaez J, Aguilar JM, Haji D, Matsunaga T, Armstrong EE, Zych M, Ogawa Y, Stamenković-Radak M, Jelić M, Veselinović MS, Tanasković M, Erić P, Gao JJ, Katoh TK, Toda MJ, Watabe H, Watada M, Davis JS, Moyle LC, Manoli G, Bertolini E, Košťál V, Hawley RS, Takahashi A, Jones CD, Price DK, Whiteman N, Kopp A, Matute DR, Petrov DA. Kim BY, et al. Among authors: toda mj. Elife. 2021 Jul 19;10:e66405. doi: 10.7554/eLife.66405. Elife. 2021. PMID: 34279216 Free PMC article.
DrosoPhyla: Resources for Drosophilid Phylogeny and Systematics.
Finet C, Kassner VA, Carvalho AB, Chung H, Day JP, Day S, Delaney EK, De Ré FC, Dufour HD, Dupim E, Izumitani HF, Gautério TB, Justen J, Katoh T, Kopp A, Koshikawa S, Longdon B, Loreto EL, Nunes MDS, Raja KKB, Rebeiz M, Ritchie MG, Saakyan G, Sneddon T, Teramoto M, Tyukmaeva V, Vanderlinde T, Wey EE, Werner T, Williams TM, Robe LJ, Toda MJ, Marlétaz F. Finet C, et al. Among authors: toda mj. Genome Biol Evol. 2021 Aug 3;13(8):evab179. doi: 10.1093/gbe/evab179. Genome Biol Evol. 2021. PMID: 34343293 Free PMC article.
Correction: Highly contiguous assemblies of 101 drosophilid genomes.
Kim BY, Wang JR, Miller DE, Barmina O, Delaney E, Thompson A, Comeault AA, Peede D, D'Agostino ERR, Pelaez J, Aguilar JM, Haji D, Matsunaga T, Armstrong E, Zych M, Ogawa Y, Stamenković-Radak M, Jelić M, Veselinović MS, Tanasković M, Erić P, Gao JJ, Katoh TK, Toda MJ, Watabe H, Watada M, Davis JS, Moyle LC, Manoli G, Bertolini E, Košťál V, Hawley RS, Takahashi A, Jones CD, Price DK, Whiteman N, Kopp A, Matute DR, Petrov DA. Kim BY, et al. Among authors: toda mj. Elife. 2022 Mar 18;11:e78579. doi: 10.7554/eLife.78579. Elife. 2022. PMID: 35302486 Free PMC article.
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