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Retrospective for the Dynamic Sensorium Competition for predicting large-scale mouse primary visual cortex activity from videos.
Turishcheva P, Fahey PG, Vystrčilová M, Hansel L, Froebe R, Ponder K, Qiu Y, Willeke KF, Bashiri M, Baikulov R, Zhu Y, Ma L, Yu S, Huang T, Li BM, Wulf W, Kudryashova N, Hennig MH, Rochefort NL, Onken A, Wang E, Ding Z, Tolias AS, Sinz FH, Ecker AS. Turishcheva P, et al. Among authors: wang e. ArXiv [Preprint]. 2024 Jul 12:arXiv:2407.09100v1. ArXiv. 2024. PMID: 39040641 Free PMC article. Preprint.
Bipartite invariance in mouse primary visual cortex.
Ding Z, Tran DT, Ponder K, Cobos E, Ding Z, Fahey PG, Wang E, Muhammad T, Fu J, Cadena SA, Papadopoulos S, Patel S, Franke K, Reimer J, Sinz FH, Ecker AS, Pitkow X, Tolias AS. Ding Z, et al. Among authors: wang e. bioRxiv [Preprint]. 2023 Mar 16:2023.03.15.532836. doi: 10.1101/2023.03.15.532836. bioRxiv. 2023. PMID: 36993218 Free PMC article. Preprint.
Foundation model of neural activity predicts response to new stimulus types and anatomy.
Wang EY, Fahey PG, Ding Z, Papadopoulos S, Ponder K, Weis MA, Chang A, Muhammad T, Patel S, Ding Z, Tran D, Fu J, Schneider-Mizell CM, Reid RC, Collman F, da Costa NM, Franke K, Ecker AS, Reimer J, Pitkow X, Sinz FH, Tolias AS. Wang EY, et al. bioRxiv [Preprint]. 2024 Aug 31:2023.03.21.533548. doi: 10.1101/2023.03.21.533548. bioRxiv. 2024. PMID: 36993435 Free PMC article. Preprint.
Pattern completion and disruption characterize contextual modulation in the visual cortex.
Fu J, Shrinivasan S, Baroni L, Ding Z, Fahey PG, Pierzchlewicz P, Ponder K, Froebe R, Ntanavara L, Muhammad T, Willeke KF, Wang E, Ding Z, Tran DT, Papadopoulos S, Patel S, Reimer J, Ecker AS, Pitkow X, Antolik J, Sinz FH, Haefner RM, Tolias AS, Franke K. Fu J, et al. Among authors: wang e. bioRxiv [Preprint]. 2024 May 9:2023.03.13.532473. doi: 10.1101/2023.03.13.532473. bioRxiv. 2024. PMID: 36993321 Free PMC article. Preprint.
Functional connectomics reveals general wiring rule in mouse visual cortex.
Ding Z, Fahey PG, Papadopoulos S, Wang EY, Celii B, Papadopoulos C, Chang A, Kunin AB, Tran D, Fu J, Ding Z, Patel S, Ntanavara L, Froebe R, Ponder K, Muhammad T, Alexander Bae J, Bodor AL, Brittain D, Buchanan J, Bumbarger DJ, Castro MA, Cobos E, Dorkenwald S, Elabbady L, Halageri A, Jia Z, Jordan C, Kapner D, Kemnitz N, Kinn S, Lee K, Li K, Lu R, Macrina T, Mahalingam G, Mitchell E, Mondal SS, Mu S, Nehoran B, Popovych S, Schneider-Mizell CM, Silversmith W, Takeno M, Torres R, Turner NL, Wong W, Wu J, Yin W, Yu SC, Yatsenko D, Froudarakis E, Sinz F, Josić K, Rosenbaum R, Sebastian Seung H, Collman F, da Costa NM, Clay Reid R, Walker EY, Pitkow X, Reimer J, Tolias AS. Ding Z, et al. Among authors: wang ey. bioRxiv [Preprint]. 2024 Oct 14:2023.03.13.531369. doi: 10.1101/2023.03.13.531369. bioRxiv. 2024. PMID: 36993398 Free PMC article. Preprint.
NEURD offers automated proofreading and feature extraction for connectomics.
Celii B, Papadopoulos S, Ding Z, Fahey PG, Wang E, Papadopoulos C, Kunin A, Patel S, Bae JA, Bodor AL, Brittain D, Buchanan J, Bumbarger DJ, Castro MA, Cobos E, Dorkenwald S, Elabbady L, Halageri A, Jia Z, Jordan C, Kapner D, Kemnitz N, Kinn S, Lee K, Li K, Lu R, Macrina T, Mahalingam G, Mitchell E, Mondal SS, Mu S, Nehoran B, Popovych S, Schneider-Mizell CM, Silversmith W, Takeno M, Torres R, Turner NL, Wong W, Wu J, Yu SC, Yin W, Xenes D, Kitchell LM, Rivlin PK, Rose VA, Bishop CA, Wester B, Froudarakis E, Walker EY, Sinz FH, Seung HS, Collman F, da Costa NM, Reid RC, Pitkow X, Tolias AS, Reimer J. Celii B, et al. Among authors: wang e. bioRxiv [Preprint]. 2024 Sep 23:2023.03.14.532674. doi: 10.1101/2023.03.14.532674. bioRxiv. 2024. PMID: 36993282 Free PMC article. Preprint.
Tumor burden with AFP improves survival prediction for TACE-treated patients with HCC: An international observational study☆.
Xia D, Bai W, Wang Q, Chung JW, Adhoute X, Kloeckner R, Zhang H, Zeng Y, Sripongpun P, Nie C, Kim SU, Huang M, Hu W, Ding X, Yin G, Li H, Zhao H, Bronowicki JP, Li J, Li J, Zhu X, Wu J, Zhang C, Gong W, Li Z, Lin Z, Xu T, Yin T, Anty R, Song J, Shi H, Shao G, Ren W, Zhang Y, Yang S, Zheng Y, Xu J, Wang W, Zhu X, Fu Y, Liu C, Kaewdech A, Ding R, Zheng J, Liu S, Yu H, Zheng L, You N, Fan W, Zhang S, Feng L, Wang G, Zhang P, Li X, Chen J, Zhang F, Shao W, Zhou W, Zeng H, Cao G, Huang W, Jiang W, Zhang W, Li L, Feng A, Wang E, Wang Z, Han D, Lv Y, Sun J, Ren B, Xia L, Li X, Yuan J, Wang Z, Luo B, Li K, Guo W, Yin Z, Zhao Y, Xia J, Fan D, Wu K, Bettinger D, Vogel A, Han G; China HCC-TACE study group. Xia D, et al. Among authors: wang e. JHEP Rep. 2024 Sep 12;7(1):101216. doi: 10.1016/j.jhepr.2024.101216. eCollection 2025 Jan. JHEP Rep. 2024. PMID: 39758510 Free PMC article.
8,412 results