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Page 1
Virus ecology and 7-year temporal dynamics across a permafrost thaw gradient.
Sun CL, Pratama AA, Gazitúa MC, Cronin D, McGivern BB, Wainaina JM, Vik DR, Zayed AA, Bolduc B; IsoGenie Project Field Teams 2010‐2017, the IsoGenie and EMERGE Projects Coordinators; Wrighton KC, Rich VI, Sullivan MB. Sun CL, et al. Among authors: wrighton kc. Environ Microbiol. 2024 Jul;26(8):e16665. doi: 10.1111/1462-2920.16665. Environ Microbiol. 2024. PMID: 39101434
Host-linked soil viral ecology along a permafrost thaw gradient.
Emerson JB, Roux S, Brum JR, Bolduc B, Woodcroft BJ, Jang HB, Singleton CM, Solden LM, Naas AE, Boyd JA, Hodgkins SB, Wilson RM, Trubl G, Li C, Frolking S, Pope PB, Wrighton KC, Crill PM, Chanton JP, Saleska SR, Tyson GW, Rich VI, Sullivan MB. Emerson JB, et al. Among authors: wrighton kc. Nat Microbiol. 2018 Aug;3(8):870-880. doi: 10.1038/s41564-018-0190-y. Epub 2018 Jul 16. Nat Microbiol. 2018. PMID: 30013236 Free PMC article.
Soil Viruses Are Underexplored Players in Ecosystem Carbon Processing.
Trubl G, Jang HB, Roux S, Emerson JB, Solonenko N, Vik DR, Solden L, Ellenbogen J, Runyon AT, Bolduc B, Woodcroft BJ, Saleska SR, Tyson GW, Wrighton KC, Sullivan MB, Rich VI. Trubl G, et al. Among authors: wrighton kc. mSystems. 2018 Oct 2;3(5):e00076-18. doi: 10.1128/mSystems.00076-18. eCollection 2018 Sep-Oct. mSystems. 2018. PMID: 30320215 Free PMC article.
Interspecies cross-feeding orchestrates carbon degradation in the rumen ecosystem.
Solden LM, Naas AE, Roux S, Daly RA, Collins WB, Nicora CD, Purvine SO, Hoyt DW, Schückel J, Jørgensen B, Willats W, Spalinger DE, Firkins JL, Lipton MS, Sullivan MB, Pope PB, Wrighton KC. Solden LM, et al. Among authors: wrighton kc. Nat Microbiol. 2018 Nov;3(11):1274-1284. doi: 10.1038/s41564-018-0225-4. Epub 2018 Oct 24. Nat Microbiol. 2018. PMID: 30356154 Free PMC article.
Minimum Information about an Uncultivated Virus Genome (MIUViG).
Roux S, Adriaenssens EM, Dutilh BE, Koonin EV, Kropinski AM, Krupovic M, Kuhn JH, Lavigne R, Brister JR, Varsani A, Amid C, Aziz RK, Bordenstein SR, Bork P, Breitbart M, Cochrane GR, Daly RA, Desnues C, Duhaime MB, Emerson JB, Enault F, Fuhrman JA, Hingamp P, Hugenholtz P, Hurwitz BL, Ivanova NN, Labonté JM, Lee KB, Malmstrom RR, Martinez-Garcia M, Mizrachi IK, Ogata H, Páez-Espino D, Petit MA, Putonti C, Rattei T, Reyes A, Rodriguez-Valera F, Rosario K, Schriml L, Schulz F, Steward GF, Sullivan MB, Sunagawa S, Suttle CA, Temperton B, Tringe SG, Thurber RV, Webster NS, Whiteson KL, Wilhelm SW, Wommack KE, Woyke T, Wrighton KC, Yilmaz P, Yoshida T, Young MJ, Yutin N, Allen LZ, Kyrpides NC, Eloe-Fadrosh EA. Roux S, et al. Among authors: wrighton kc. Nat Biotechnol. 2019 Jan;37(1):29-37. doi: 10.1038/nbt.4306. Epub 2018 Dec 17. Nat Biotechnol. 2019. PMID: 30556814 Free PMC article.
DRAM for distilling microbial metabolism to automate the curation of microbiome function.
Shaffer M, Borton MA, McGivern BB, Zayed AA, La Rosa SL, Solden LM, Liu P, Narrowe AB, Rodríguez-Ramos J, Bolduc B, Gazitúa MC, Daly RA, Smith GJ, Vik DR, Pope PB, Sullivan MB, Roux S, Wrighton KC. Shaffer M, et al. Among authors: wrighton kc. Nucleic Acids Res. 2020 Sep 18;48(16):8883-8900. doi: 10.1093/nar/gkaa621. Nucleic Acids Res. 2020. PMID: 32766782 Free PMC article.
A genomic catalog of Earth's microbiomes.
Nayfach S, Roux S, Seshadri R, Udwary D, Varghese N, Schulz F, Wu D, Paez-Espino D, Chen IM, Huntemann M, Palaniappan K, Ladau J, Mukherjee S, Reddy TBK, Nielsen T, Kirton E, Faria JP, Edirisinghe JN, Henry CS, Jungbluth SP, Chivian D, Dehal P, Wood-Charlson EM, Arkin AP, Tringe SG, Visel A; IMG/M Data Consortium; Woyke T, Mouncey NJ, Ivanova NN, Kyrpides NC, Eloe-Fadrosh EA. Nayfach S, et al. Nat Biotechnol. 2021 Apr;39(4):499-509. doi: 10.1038/s41587-020-0718-6. Epub 2020 Nov 9. Nat Biotechnol. 2021. PMID: 33169036 Free PMC article.
Decrypting bacterial polyphenol metabolism in an anoxic wetland soil.
McGivern BB, Tfaily MM, Borton MA, Kosina SM, Daly RA, Nicora CD, Purvine SO, Wong AR, Lipton MS, Hoyt DW, Northen TR, Hagerman AE, Wrighton KC. McGivern BB, et al. Among authors: wrighton kc. Nat Commun. 2021 Apr 29;12(1):2466. doi: 10.1038/s41467-021-22765-1. Nat Commun. 2021. PMID: 33927199 Free PMC article.
112 results