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Page 1
Genetic-epigenetic interplay in the determination of plant 3D genome organization.
He X, Dias Lopes C, Pereyra-Bistrain LI, Huang Y, An J, Chaouche RB, Zalzalé H, Wang Q, Ma X, Antunez-Sanchez J, Bergounioux C, Piquerez S, Fragkostefanakis S, Zhang Y, Zheng S, Crespi M, Mahfouz MM, Mathieu O, Ariel F, Gutierrez-Marcos J, Li X, Bouché N, Raynaud C, Latrasse D, Benhamed M. He X, et al. Among authors: bergounioux c. Nucleic Acids Res. 2024 Sep 23;52(17):10220-10234. doi: 10.1093/nar/gkae690. Nucleic Acids Res. 2024. PMID: 39149894 Free PMC article.
Dual function of MIPS1 as a metabolic enzyme and transcriptional regulator.
Latrasse D, Jégu T, Meng PH, Mazubert C, Hudik E, Delarue M, Charon C, Crespi M, Hirt H, Raynaud C, Bergounioux C, Benhamed M. Latrasse D, et al. Among authors: bergounioux c. Nucleic Acids Res. 2013 Mar 1;41(5):2907-17. doi: 10.1093/nar/gks1458. Epub 2013 Jan 21. Nucleic Acids Res. 2013. PMID: 23341037 Free PMC article.
GCN5 modulates salicylic acid homeostasis by regulating H3K14ac levels at the 5' and 3' ends of its target genes.
Kim S, Piquerez SJM, Ramirez-Prado JS, Mastorakis E, Veluchamy A, Latrasse D, Manza-Mianza D, Brik-Chaouche R, Huang Y, Rodriguez-Granados NY, Concia L, Blein T, Citerne S, Bendahmane A, Bergounioux C, Crespi M, Mahfouz MM, Raynaud C, Hirt H, Ntoukakis V, Benhamed M. Kim S, et al. Among authors: bergounioux c. Nucleic Acids Res. 2020 Jun 19;48(11):5953-5966. doi: 10.1093/nar/gkaa369. Nucleic Acids Res. 2020. PMID: 32396165 Free PMC article.
Polycomb-dependent differential chromatin compartmentalization determines gene coregulation in Arabidopsis.
Huang Y, Sicar S, Ramirez-Prado JS, Manza-Mianza D, Antunez-Sanchez J, Brik-Chaouche R, Rodriguez-Granados NY, An J, Bergounioux C, Mahfouz MM, Hirt H, Crespi M, Concia L, Barneche F, Amiard S, Probst AV, Gutierrez-Marcos J, Ariel F, Raynaud C, Latrasse D, Benhamed M. Huang Y, et al. Among authors: bergounioux c. Genome Res. 2021 Jul;31(7):1230-1244. doi: 10.1101/gr.273771.120. Epub 2021 Jun 3. Genome Res. 2021. PMID: 34083408 Free PMC article.
HSFA1a modulates plant heat stress responses and alters the 3D chromatin organization of enhancer-promoter interactions.
Huang Y, An J, Sircar S, Bergis C, Lopes CD, He X, Da Costa B, Tan FQ, Bazin J, Antunez-Sanchez J, Mammarella MF, Devani RS, Brik-Chaouche R, Bendahmane A, Frugier F, Xia C, Rothan C, Probst AV, Mohamed Z, Bergounioux C, Delarue M, Zhang Y, Zheng S, Crespi M, Fragkostefanakis S, Mahfouz MM, Ariel F, Gutierrez-Marcos J, Raynaud C, Latrasse D, Benhamed M. Huang Y, et al. Among authors: bergounioux c. Nat Commun. 2023 Jan 28;14(1):469. doi: 10.1038/s41467-023-36227-3. Nat Commun. 2023. PMID: 36709329 Free PMC article.
An atlas of the tomato epigenome reveals that KRYPTONITE shapes TAD-like boundaries through the control of H3K9ac distribution.
An J, Brik Chaouche R, Pereyra-Bistraín LI, Zalzalé H, Wang Q, Huang Y, He X, Dias Lopes C, Antunez-Sanchez J, Bergounioux C, Boulogne C, Dupas C, Gillet C, Pérez-Pérez JM, Mathieu O, Bouché N, Fragkostefanakis S, Zhang Y, Zheng S, Crespi M, Mahfouz MM, Ariel F, Gutierrez-Marcos J, Raynaud C, Latrasse D, Benhamed M. An J, et al. Among authors: bergounioux c. Proc Natl Acad Sci U S A. 2024 Jul 9;121(28):e2400737121. doi: 10.1073/pnas.2400737121. Epub 2024 Jul 5. Proc Natl Acad Sci U S A. 2024. PMID: 38968127 Free PMC article.
Plant programmed cell death from a chromatin point of view.
Latrasse D, Benhamed M, Bergounioux C, Raynaud C, Delarue M. Latrasse D, et al. Among authors: bergounioux c. J Exp Bot. 2016 Oct;67(20):5887-5900. doi: 10.1093/jxb/erw329. Epub 2016 Sep 17. J Exp Bot. 2016. PMID: 27639093 Review.
Wheat chromatin architecture is organized in genome territories and transcription factories.
Concia L, Veluchamy A, Ramirez-Prado JS, Martin-Ramirez A, Huang Y, Perez M, Domenichini S, Rodriguez Granados NY, Kim S, Blein T, Duncan S, Pichot C, Manza-Mianza D, Juery C, Paux E, Moore G, Hirt H, Bergounioux C, Crespi M, Mahfouz MM, Bendahmane A, Liu C, Hall A, Raynaud C, Latrasse D, Benhamed M. Concia L, et al. Among authors: bergounioux c. Genome Biol. 2020 Apr 29;21(1):104. doi: 10.1186/s13059-020-01998-1. Genome Biol. 2020. PMID: 32349780 Free PMC article.
78 results