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Genetic-epigenetic interplay in the determination of plant 3D genome organization.
He X, Dias Lopes C, Pereyra-Bistrain LI, Huang Y, An J, Chaouche RB, Zalzalé H, Wang Q, Ma X, Antunez-Sanchez J, Bergounioux C, Piquerez S, Fragkostefanakis S, Zhang Y, Zheng S, Crespi M, Mahfouz MM, Mathieu O, Ariel F, Gutierrez-Marcos J, Li X, Bouché N, Raynaud C, Latrasse D, Benhamed M. He X, et al. Among authors: mahfouz mm. Nucleic Acids Res. 2024 Sep 23;52(17):10220-10234. doi: 10.1093/nar/gkae690. Nucleic Acids Res. 2024. PMID: 39149894 Free PMC article.
The Arabidopsis SWI/SNF protein BAF60 mediates seedling growth control by modulating DNA accessibility.
Jégu T, Veluchamy A, Ramirez-Prado JS, Rizzi-Paillet C, Perez M, Lhomme A, Latrasse D, Coleno E, Vicaire S, Legras S, Jost B, Rougée M, Barneche F, Bergounioux C, Crespi M, Mahfouz MM, Hirt H, Raynaud C, Benhamed M. Jégu T, et al. Among authors: mahfouz mm. Genome Biol. 2017 Jun 15;18(1):114. doi: 10.1186/s13059-017-1246-7. Genome Biol. 2017. PMID: 28619072 Free PMC article.
Thermopriming triggers splicing memory in Arabidopsis.
Ling Y, Serrano N, Gao G, Atia M, Mokhtar M, Woo YH, Bazin J, Veluchamy A, Benhamed M, Crespi M, Gehring C, Reddy ASN, Mahfouz MM. Ling Y, et al. Among authors: mahfouz mm. J Exp Bot. 2018 Apr 27;69(10):2659-2675. doi: 10.1093/jxb/ery062. J Exp Bot. 2018. PMID: 29474581 Free PMC article.
Wheat chromatin architecture is organized in genome territories and transcription factories.
Concia L, Veluchamy A, Ramirez-Prado JS, Martin-Ramirez A, Huang Y, Perez M, Domenichini S, Rodriguez Granados NY, Kim S, Blein T, Duncan S, Pichot C, Manza-Mianza D, Juery C, Paux E, Moore G, Hirt H, Bergounioux C, Crespi M, Mahfouz MM, Bendahmane A, Liu C, Hall A, Raynaud C, Latrasse D, Benhamed M. Concia L, et al. Among authors: mahfouz mm. Genome Biol. 2020 Apr 29;21(1):104. doi: 10.1186/s13059-020-01998-1. Genome Biol. 2020. PMID: 32349780 Free PMC article.
GCN5 modulates salicylic acid homeostasis by regulating H3K14ac levels at the 5' and 3' ends of its target genes.
Kim S, Piquerez SJM, Ramirez-Prado JS, Mastorakis E, Veluchamy A, Latrasse D, Manza-Mianza D, Brik-Chaouche R, Huang Y, Rodriguez-Granados NY, Concia L, Blein T, Citerne S, Bendahmane A, Bergounioux C, Crespi M, Mahfouz MM, Raynaud C, Hirt H, Ntoukakis V, Benhamed M. Kim S, et al. Among authors: mahfouz mm. Nucleic Acids Res. 2020 Jun 19;48(11):5953-5966. doi: 10.1093/nar/gkaa369. Nucleic Acids Res. 2020. PMID: 32396165 Free PMC article.
Polycomb-dependent differential chromatin compartmentalization determines gene coregulation in Arabidopsis.
Huang Y, Sicar S, Ramirez-Prado JS, Manza-Mianza D, Antunez-Sanchez J, Brik-Chaouche R, Rodriguez-Granados NY, An J, Bergounioux C, Mahfouz MM, Hirt H, Crespi M, Concia L, Barneche F, Amiard S, Probst AV, Gutierrez-Marcos J, Ariel F, Raynaud C, Latrasse D, Benhamed M. Huang Y, et al. Among authors: mahfouz mm. Genome Res. 2021 Jul;31(7):1230-1244. doi: 10.1101/gr.273771.120. Epub 2021 Jun 3. Genome Res. 2021. PMID: 34083408 Free PMC article.
161 results