Yalamanchili HK - Search Results

1

The big tau splice isoform resists Alzheimer's-related pathological changes.

Chung DC, Deng X, Yalamanchili HK, Revelli JP, Han AL, Tadros B, Richman R, Dias M, Naini FA, Boeynaems S, Hyman BT, Zoghbi HY. Chung DC, et al. Among authors: yalamanchili hk. bioRxiv [Preprint]. 2024 Jul 31:2024.07.30.605685. doi: 10.1101/2024.07.30.605685. bioRxiv. 2024. PMID: 39211086 Free PMC article. Preprint.

2

Emerging roles of alternative cleavage and polyadenylation (APA) in human disease.

Dharmalingam P, Mahalingam R, Yalamanchili HK, Weng T, Karmouty-Quintana H, Guha A, A Thandavarayan R. Dharmalingam P, et al. Among authors: yalamanchili hk. J Cell Physiol. 2022 Jan;237(1):149-160. doi: 10.1002/jcp.30549. Epub 2021 Aug 11. J Cell Physiol. 2022. PMID: 34378793 Review.

3

SpliceNet: recovering splicing isoform-specific differential gene networks from RNA-Seq data of normal and diseased samples.

Yalamanchili HK, Li Z, Wang P, Wong MP, Yao J, Wang J. Yalamanchili HK, et al. Nucleic Acids Res. 2014 Sep;42(15):e121. doi: 10.1093/nar/gku577. Epub 2014 Jul 17. Nucleic Acids Res. 2014. PMID: 25034693 Free PMC article.

4

PolyAMiner-Bulk is a deep learning-based algorithm that decodes alternative polyadenylation dynamics from bulk RNA-seq data.

Jonnakuti VS, Wagner EJ, Maletić-Savatić M, Liu Z, Yalamanchili HK. Jonnakuti VS, et al. Among authors: yalamanchili hk. Cell Rep Methods. 2024 Feb 26;4(2):100707. doi: 10.1016/j.crmeth.2024.100707. Epub 2024 Feb 6. Cell Rep Methods. 2024. PMID: 38325383 Free PMC article.

5

DDGni: dynamic delay gene-network inference from high-temporal data using gapped local alignment.

Yalamanchili HK, Yan B, Li MJ, Qin J, Zhao Z, Chin FY, Wang J. Yalamanchili HK, et al. Bioinformatics. 2014 Feb 1;30(3):377-83. doi: 10.1093/bioinformatics/btt692. Epub 2013 Nov 27. Bioinformatics. 2014. PMID: 24285602

6

Data Analysis Pipeline for RNA-seq Experiments: From Differential Expression to Cryptic Splicing.

Yalamanchili HK, Wan YW, Liu Z. Yalamanchili HK, et al. Curr Protoc Bioinformatics. 2017 Sep 13;59:11.15.1-11.15.21. doi: 10.1002/cpbi.33. Curr Protoc Bioinformatics. 2017. PMID: 28902396 Free PMC article.

7

An ultra-fast and scalable quantification pipeline for transposable elements from next generation sequencing data.

Jeong HH, Yalamanchili HK, Guo C, Shulman JM, Liu Z. Jeong HH, et al. Among authors: yalamanchili hk. Pac Symp Biocomput. 2018;23:168-179. Pac Symp Biocomput. 2018. PMID: 29218879 Free article.

8

Inference of gene-phenotype associations via protein-protein interaction and orthology.

Wang P, Lai WF, Li MJ, Xu F, Yalamanchili HK, Lovell-Badge R, Wang J. Wang P, et al. Among authors: yalamanchili hk. PLoS One. 2013 Oct 23;8(10):e77478. doi: 10.1371/journal.pone.0077478. eCollection 2013. PLoS One. 2013. PMID: 24194887 Free PMC article.

9

Loss of function of NCOR1 and NCOR2 impairs memory through a novel GABAergic hypothalamus-CA3 projection.

Zhou W, He Y, Rehman AU, Kong Y, Hong S, Ding G, Yalamanchili HK, Wan YW, Paul B, Wang C, Gong Y, Zhou W, Liu H, Dean J, Scalais E, O'Driscoll M, Morton JEV; DDD study; Hou X, Wu Q, Tong Q, Liu Z, Liu P, Xu Y, Sun Z. Zhou W, et al. Among authors: yalamanchili hk. Nat Neurosci. 2019 Feb;22(2):205-217. doi: 10.1038/s41593-018-0311-1. Epub 2019 Jan 21. Nat Neurosci. 2019. PMID: 30664766 Free PMC article.

10

Acacetin causes a frequency- and use-dependent blockade of hKv1.5 channels by binding to the S6 domain.

Wu HJ, Wu W, Sun HY, Qin GW, Wang HB, Wang P, Yalamanchili HK, Wang J, Tse HF, Lau CP, Vanhoutte PM, Li GR. Wu HJ, et al. Among authors: yalamanchili hk. J Mol Cell Cardiol. 2011 Dec;51(6):966-73. doi: 10.1016/j.yjmcc.2011.08.022. Epub 2011 Aug 27. J Mol Cell Cardiol. 2011. PMID: 21906601

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