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Leveraging Generative AI to Accelerate Biocuration of Medical Actions for Rare Disease.
Niyonkuru E, Caufield JH, Carmody LC, Gargano MA, Toro S, Whetzel PL, Blau H, Gomez MS, Casiraghi E, Chimirri L, Reese JT, Valentini G, Haendel MA, Mungall CJ, Robinson PN. Niyonkuru E, et al. Among authors: casiraghi e. medRxiv [Preprint]. 2024 Aug 22:2024.08.22.24310814. doi: 10.1101/2024.08.22.24310814. medRxiv. 2024. PMID: 39228707 Free PMC article. Preprint.
NSAID use and clinical outcomes in COVID-19 patients: A 38-center retrospective cohort study.
Reese JT, Coleman B, Chan L, Blau H, Callahan TJ, Cappelletti L, Fontana T, Bradwell KR, Harris NL, Casiraghi E, Valentini G, Karlebach G, Deer R, McMurry JA, Haendel MA, Chute CG, Pfaff E, Moffitt R, Spratt H, Singh J, Mungall CJ, Williams AE, Robinson PN. Reese JT, et al. Among authors: casiraghi e. medRxiv [Preprint]. 2021 Dec 22:2021.04.13.21255438. doi: 10.1101/2021.04.13.21255438. medRxiv. 2021. Update in: Virol J. 2022 May 15;19(1):84. doi: 10.1186/s12985-022-01813-2 PMID: 33907758 Free PMC article. Updated. Preprint.
Supervised learning with word embeddings derived from PubMed captures latent knowledge about protein kinases and cancer.
Ravanmehr V, Blau H, Cappelletti L, Fontana T, Carmody L, Coleman B, George J, Reese J, Joachimiak M, Bocci G, Hansen P, Bult C, Rueter J, Casiraghi E, Valentini G, Mungall C, Oprea TI, Robinson PN. Ravanmehr V, et al. Among authors: casiraghi e. NAR Genom Bioinform. 2021 Dec 8;3(4):lqab113. doi: 10.1093/nargab/lqab113. eCollection 2021 Dec. NAR Genom Bioinform. 2021. PMID: 34888523 Free PMC article.
NSAID use and clinical outcomes in COVID-19 patients: a 38-center retrospective cohort study.
Reese JT, Coleman B, Chan L, Blau H, Callahan TJ, Cappelletti L, Fontana T, Bradwell KR, Harris NL, Casiraghi E, Valentini G, Karlebach G, Deer R, McMurry JA, Haendel MA, Chute CG, Pfaff E, Moffitt R, Spratt H, Singh JA, Mungall CJ, Williams AE, Robinson PN. Reese JT, et al. Among authors: casiraghi e. Virol J. 2022 May 15;19(1):84. doi: 10.1186/s12985-022-01813-2. Virol J. 2022. PMID: 35570298 Free PMC article.
Generalizable Long COVID Subtypes: Findings from the NIH N3C and RECOVER Programs.
Reese JT, Blau H, Bergquist T, Loomba JJ, Callahan T, Laraway B, Antonescu C, Casiraghi E, Coleman B, Gargano M, Wilkins KJ, Cappelletti L, Fontana T, Ammar N, Antony B, Murali TM, Karlebach G, McMurry JA, Williams A, Moffitt R, Banerjee J, Solomonides AE, Davis H, Kostka K, Valentini G, Sahner D, Chute CG, Madlock-Brown C, Haendel MA, Robinson PN; RECOVER Consortium. Reese JT, et al. Among authors: casiraghi e. medRxiv [Preprint]. 2022 Jul 20:2022.05.24.22275398. doi: 10.1101/2022.05.24.22275398. medRxiv. 2022. Update in: EBioMedicine. 2023 Jan;87:104413. doi: 10.1016/j.ebiom.2022.104413 PMID: 35665012 Free PMC article. Updated. Preprint.
Metformin is Associated with Reduced COVID-19 Severity in Patients with Prediabetes.
Chan LE, Casiraghi E, Laraway B, Coleman B, Blau H, Zaman A, Harris N, Wilkins K, Gargano M, Valentini G, Sahner D, Haendel M, Robinson PN, Bramante C, Reese J. Chan LE, et al. Among authors: casiraghi e. medRxiv [Preprint]. 2022 Aug 30:2022.08.29.22279355. doi: 10.1101/2022.08.29.22279355. medRxiv. 2022. Update in: Diabetes Res Clin Pract. 2022 Dec;194:110157. doi: 10.1016/j.diabres.2022.110157 PMID: 36093353 Free PMC article. Updated. Preprint.
95 results