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V-pipe 3.0: a sustainable pipeline for within-sample viral genetic diversity estimation.
Fuhrmann L, Jablonski KP, Topolsky I, Batavia AA, Borgsmüller N, Baykal PI, Carrara M, Chen C, Dondi A, Dragan M, Dreifuss D, John A, Langer B, Okoniewski M, du Plessis L, Schmitt U, Singer F, Stadler T, Beerenwinkel N. Fuhrmann L, et al. Among authors: batavia aa. Gigascience. 2024 Jan 2;13:giae065. doi: 10.1093/gigascience/giae065. Gigascience. 2024. PMID: 39347649 Free PMC article.
The vascular gene Apold1 is dispensable for normal development but controls angiogenesis under pathological conditions.
Fan Z, Ardicoglu R, Batavia AA, Rust R, von Ziegler L, Waag R, Zhang J, Desgeorges T, Sturman O, Dang H, Weber R, Roszkowski M, Moor AE, Schwab ME, Germain PL, Bohacek J, De Bock K. Fan Z, et al. Among authors: batavia aa. Angiogenesis. 2023 Aug;26(3):385-407. doi: 10.1007/s10456-023-09870-z. Epub 2023 Mar 18. Angiogenesis. 2023. PMID: 36933174 Free PMC article.
Classic Chromophobe Renal Cell Carcinoma Incur a Larger Number of Chromosomal Losses Than Seen in the Eosinophilic Subtype.
Ohashi R, Schraml P, Angori S, Batavia AA, Rupp NJ, Ohe C, Otsuki Y, Kawasaki T, Kobayashi H, Kobayashi K, Miyazaki T, Shibuya H, Usuda H, Umezu H, Fujishima F, Furusato B, Osakabe M, Sugai T, Kuroda N, Tsuzuki T, Nagashima Y, Ajioka Y, Moch H. Ohashi R, et al. Among authors: batavia aa. Cancers (Basel). 2019 Oct 3;11(10):1492. doi: 10.3390/cancers11101492. Cancers (Basel). 2019. PMID: 31623347 Free PMC article.
Impact of differing methodologies for serum miRNA-371a-3p assessment in stage I testicular germ cell cancer recurrence.
Christiansen AJ, Lobo J, Fankhauser CD, Rothermundt C, Cathomas R, Batavia AA, Grogg JB, Templeton AJ, Hirschi-Blickenstorfer A, Lorch A, Gillessen S, Moch H, Beyer J, Hermanns T. Christiansen AJ, et al. Among authors: batavia aa. Front Oncol. 2022 Dec 8;12:1056823. doi: 10.3389/fonc.2022.1056823. eCollection 2022. Front Oncol. 2022. PMID: 36568207 Free PMC article.