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The Impact of Sugar Conformation on the Single-Stranded DNA Selectivity of APOBEC3A and APOBEC3B Enzymes.

Wyllie MK, Morris CK, Moeller NH, Schares HAM, Moorthy R, Belica CA, Grillo MJ, Demir Ö, Ayoub AM, Carpenter MA, Aihara H, Harris RS, Amaro RE, Harki DA. Wyllie MK, et al. Among authors: belica ca. ACS Chem Biol. 2024 Dec 16. doi: 10.1021/acschembio.4c00540. Online ahead of print. ACS Chem Biol. 2024. PMID: 39680033

RADD: A real-time FRET-based biochemical assay for DNA deaminase studies.

Belica CA, Hernandez PC, Carpenter MA, Chen Y, Brown WL, Harris RS, Aihara H. Belica CA, et al. Methods Enzymol. 2024;705:311-345. doi: 10.1016/bs.mie.2024.08.001. Epub 2024 Aug 27. Methods Enzymol. 2024. PMID: 39389668 Free PMC article.

A compact stem-loop DNA aptamer targets a uracil-binding pocket in the SARS-CoV-2 nucleocapsid RNA-binding domain.

Esler MA, Belica CA, Rollie JA, Brown WL, Moghadasi SA, Shi K, Harki DA, Harris RS, Aihara H. Esler MA, et al. Among authors: belica ca. Nucleic Acids Res. 2024 Nov 27;52(21):13138-13151. doi: 10.1093/nar/gkae874. Nucleic Acids Res. 2024. PMID: 39380503 Free PMC article.

A real-time biochemical assay for quantitative analyses of APOBEC-catalyzed DNA deamination.

Belica CA, Carpenter MA, Chen Y, Brown WL, Moeller NH, Boylan IT, Harris RS, Aihara H. Belica CA, et al. J Biol Chem. 2024 Jun;300(6):107410. doi: 10.1016/j.jbc.2024.107410. Epub 2024 May 23. J Biol Chem. 2024. PMID: 38796062 Free PMC article.

A real-time biochemical assay for quantitative analyses of APOBEC-catalyzed DNA deamination.

Belica CA, Carpenter MA, Chen Y, Brown WL, Moeller NH, Boylan IT, Harris RS, Aihara H. Belica CA, et al. bioRxiv [Preprint]. 2024 May 12:2024.05.11.593688. doi: 10.1101/2024.05.11.593688. bioRxiv. 2024. Update in: J Biol Chem. 2024 Jun;300(6):107410. doi: 10.1016/j.jbc.2024.107410 PMID: 38766133 Free PMC article. Updated. Preprint.

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