Wang T - Search Results

1

Microbiome-based correction for random errors in nutrient profiles derived from self-reported dietary assessments.

Wang T, Fu Y, Shuai M, Zheng JS, Zhu L, Chan AT, Sun Q, Hu FB, Weiss ST, Liu YY. Wang T, et al. Nat Commun. 2024 Oct 22;15(1):9112. doi: 10.1038/s41467-024-53567-w. Nat Commun. 2024. PMID: 39438479 Free PMC article.

2

Removal of false positives in metagenomics-based taxonomy profiling via targeting Type IIB restriction sites.

Sun Z, Liu J, Zhang M, Wang T, Huang S, Weiss ST, Liu YY. Sun Z, et al. Among authors: wang t. Nat Commun. 2023 Sep 1;14(1):5321. doi: 10.1038/s41467-023-41099-8. Nat Commun. 2023. PMID: 37658057 Free PMC article.

3

Predicting metabolite response to dietary intervention using deep learning.

Wang T, Holscher HD, Maslov S, Hu FB, Weiss ST, Liu YY. Wang T, et al. bioRxiv [Preprint]. 2024 Sep 19:2023.03.14.532589. doi: 10.1101/2023.03.14.532589. bioRxiv. 2024. PMID: 36993761 Free PMC article. Preprint.

4

Revealing proteome-level functional redundancy in the human gut microbiome using ultra-deep metaproteomics.

Li L, Wang T, Ning Z, Zhang X, Butcher J, Serrana JM, Simopoulos CMA, Mayne J, Stintzi A, Mack DR, Liu YY, Figeys D. Li L, et al. Among authors: wang t. Nat Commun. 2023 Jun 10;14(1):3428. doi: 10.1038/s41467-023-39149-2. Nat Commun. 2023. PMID: 37301875 Free PMC article.

5

Predicting metabolomic profiles from microbial composition through neural ordinary differential equations.

Wang T, Wang XW, Lee-Sarwar KA, Litonjua AA, Weiss ST, Sun Y, Maslov S, Liu YY. Wang T, et al. Among authors: wang xw. Nat Mach Intell. 2023 Mar;5(3):284-293. doi: 10.1038/s42256-023-00627-3. Epub 2023 Mar 13. Nat Mach Intell. 2023. PMID: 38223254 Free PMC article.

6

Data-driven prediction of colonization outcomes for complex microbial communities.

Wu L, Wang XW, Tao Z, Wang T, Zuo W, Zeng Y, Liu YY, Dai L. Wu L, et al. Among authors: wang xw, wang t. Nat Commun. 2024 Mar 16;15(1):2406. doi: 10.1038/s41467-024-46766-y. Nat Commun. 2024. PMID: 38493186 Free PMC article.

7

Pairing metagenomics and metaproteomics to characterize ecological niches and metabolic essentiality of gut microbiomes.

Wang T, Li L, Figeys D, Liu YY. Wang T, et al. ISME Commun. 2024 May 1;4(1):ycae063. doi: 10.1093/ismeco/ycae063. eCollection 2024 Jan. ISME Commun. 2024. PMID: 38808120 Free PMC article.

8

Ecology-guided prediction of cross-feeding interactions in the human gut microbiome.

Goyal A, Wang T, Dubinkina V, Maslov S. Goyal A, et al. Among authors: wang t. Nat Commun. 2021 Feb 26;12(1):1335. doi: 10.1038/s41467-021-21586-6. Nat Commun. 2021. PMID: 33637740 Free PMC article.

9

Benchmarking omics-based prediction of asthma development in children.

Wang XW, Wang T, Schaub DP, Chen C, Sun Z, Ke S, Hecker J, Maaser-Hecker A, Zeleznik OA, Zeleznik R, Litonjua AA, DeMeo DL, Lasky-Su J, Silverman EK, Liu YY, Weiss ST. Wang XW, et al. Among authors: wang t. Respir Res. 2023 Feb 26;24(1):63. doi: 10.1186/s12931-023-02368-8. Respir Res. 2023. PMID: 36842969 Free PMC article.

10

Complementary resource preferences spontaneously emerge in diauxic microbial communities.

Wang Z, Goyal A, Dubinkina V, George AB, Wang T, Fridman Y, Maslov S. Wang Z, et al. Among authors: wang t. Nat Commun. 2021 Nov 18;12(1):6661. doi: 10.1038/s41467-021-27023-y. Nat Commun. 2021. PMID: 34795267 Free PMC article.

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