Dean K - Search Results

1

ClassifieR 2.0: expanding interactive gene expression-based stratification to prostate and high-grade serous ovarian cancer.

McCabe A, Quinn GP, Jain S, Ó Dálaigh M, Dean K, Murphy RG, McDade SS. McCabe A, et al. Among authors: dean k. BMC Bioinformatics. 2024 Nov 21;25(1):362. doi: 10.1186/s12859-024-05981-6. BMC Bioinformatics. 2024. PMID: 39574035 Free PMC article.

2

Investigating the suitability of in vitro cell lines as models for the major subtypes of epithelial ovarian cancer.

McCabe A, Zaheed O, McDade SS, Dean K. McCabe A, et al. Among authors: dean k. Front Cell Dev Biol. 2023 Feb 13;11:1104514. doi: 10.3389/fcell.2023.1104514. eCollection 2023. Front Cell Dev Biol. 2023. PMID: 36861035 Free PMC article.

3

The copious capabilities of non-coding RNAs in cancer regulation, diagnosis and treatment.

McCabe A, Zaheed O, Derlipanska M, Merrin G, Dean K. McCabe A, et al. Among authors: dean k. Cancer Treat Res Commun. 2023;37:100768. doi: 10.1016/j.ctarc.2023.100768. Epub 2023 Oct 13. Cancer Treat Res Commun. 2023. PMID: 37852123 Free article. Review.

4

Molecular and cellular characterization of two patient-derived ductal carcinoma in situ (DCIS) cell lines, ETCC-006 and ETCC-010.

Samson J, Derlipanska M, Zaheed O, Dean K. Samson J, et al. Among authors: dean k. BMC Cancer. 2021 Jul 8;21(1):790. doi: 10.1186/s12885-021-08511-2. BMC Cancer. 2021. PMID: 34238275 Free PMC article.

5

A bioinformatics approach to identify novel long, non-coding RNAs in breast cancer cell lines from an existing RNA-sequencing dataset.

Zaheed O, Samson J, Dean K. Zaheed O, et al. Among authors: dean k. Noncoding RNA Res. 2020 Feb 24;5(2):48-59. doi: 10.1016/j.ncrna.2020.02.004. eCollection 2020 Jun. Noncoding RNA Res. 2020. PMID: 32206740 Free PMC article.

6

Research Strategies for Low-Survival Cancers.

Conway C, Collins DM, McCann A, Dean K. Conway C, et al. Among authors: dean k. Cancers (Basel). 2021 Jan 30;13(3):528. doi: 10.3390/cancers13030528. Cancers (Basel). 2021. PMID: 33573275 Free PMC article.

7

BC200 (BCYRN1) - The shortest, long, non-coding RNA associated with cancer.

Samson J, Cronin S, Dean K. Samson J, et al. Among authors: dean k. Noncoding RNA Res. 2018 May 22;3(3):131-143. doi: 10.1016/j.ncrna.2018.05.003. eCollection 2018 Sep. Noncoding RNA Res. 2018. PMID: 30175286 Free PMC article. Review.

8

Exploring Evidence of Non-coding RNA Translation With Trips-Viz and GWIPS-Viz Browsers.

Zaheed O, Kiniry SJ, Baranov PV, Dean K. Zaheed O, et al. Among authors: dean k. Front Cell Dev Biol. 2021 Aug 12;9:703374. doi: 10.3389/fcell.2021.703374. eCollection 2021. Front Cell Dev Biol. 2021. PMID: 34490252 Free PMC article.

9

High-quality peptide evidence for annotating non-canonical open reading frames as human proteins.

Deutsch EW, Kok LW, Mudge JM, Ruiz-Orera J, Fierro-Monti I, Sun Z, Abelin JG, Alba MM, Aspden JL, Bazzini AA, Bruford EA, Brunet MA, Calviello L, Carr SA, Carvunis AR, Chothani S, Clauwaert J, Dean K, Faridi P, Frankish A, Hubner N, Ingolia NT, Magrane M, Martin MJ, Martinez TF, Menschaert G, Ohler U, Orchard S, Rackham O, Roucou X, Slavoff SA, Valen E, Wacholder A, Weissman JS, Wu W, Xie Z, Choudhary J, Bassani-Sternberg M, Vizcaíno JA, Ternette N, Moritz RL, Prensner JR, van Heesch S. Deutsch EW, et al. Among authors: dean k. bioRxiv [Preprint]. 2024 Sep 9:2024.09.09.612016. doi: 10.1101/2024.09.09.612016. bioRxiv. 2024. PMID: 39314370 Free PMC article. Preprint.

10

Characterizing and Exploiting Tumor Microenvironments to Optimize Treatment Outcomes.

Allott EH, Dean K, Robson T, Meaney C. Allott EH, et al. Among authors: dean k. Cancers (Basel). 2021 Nov 17;13(22):5752. doi: 10.3390/cancers13225752. Cancers (Basel). 2021. PMID: 34830906 Free PMC article.

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