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19 results

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Page 1
CARDBiomedBench: A Benchmark for Evaluating Large Language Model Performance in Biomedical Research.
Bianchi O, Willey M, Alvarado CX, Danek B, Khani M, Kuznetsov N, Dadu A, Shah S, Koretsky MJ, Makarious MB, Weller C, Levine KS, Kim S, Jarreau P, Vitale D, Marsan E, Iwaki H, Leonard H, Bandres-Ciga S, Singleton AB, Nalls MA, Mokhtari S, Khashabi D, Faghri F. Bianchi O, et al. Among authors: koretsky mj. bioRxiv [Preprint]. 2025 Jan 21:2025.01.15.633272. doi: 10.1101/2025.01.15.633272. bioRxiv. 2025. PMID: 39868292 Free PMC article. Preprint.
Large-scale genetic characterization of Parkinson's disease in the African and African admixed populations.
Akçimen F, Paquette K, Crea PW, Saffie-Awad P, Achoru C, Taiwo F, Ozomma S, Onwuegbuzie G, Khani M, Grant S, Owolabi L, Okereke C, Oshinaike O, Iwuozo E, Lee PS, Oyakhire S, Osemwegie N, Daida K, Abubakar S, Olusanya A, Isayan M, Traurig R, Ogunmodede A, Samuel S, Makarious MB, Sa'ad F, Olanigan R, Levine K, Ogbimi EM, Vitale D, Odiase F, Koretsky MJ, Ojini F, Odeniyi O, Fang ZH, Obianozie N, Hall DA, Nwazor E, Xie T, Nwaokorie F, Padmanaban M, Nwani P, Shamim EA, Nnama A, Standaert D, Komolafe M, Dean M, Osaigbovo G, Disbrow E, Ishola I, Rawls A, Imarhiagbe F, Chandra S, Erameh C, Hinson V, Louie N, Idowu A, Solle J, Norris SA, Ibrahim A, Kilbane C, Sukumar G, Shulman LM, Ezuduemoih D, Staisch J, Breaux S, Dalgard C, Foster ER, Bello A, Ameri A, Real R, Ikwenu E, Morris HR, Anyanwu R, Stimming EF, Billingsley K, Alaofin W, Jerez PA, Agabi O, Hernandez DG, Akinyemi R, Arepalli S, Malik L, Owolabi R, Nyandaiti Y, Leonard HL, Wahab K, Step K, Abiodun O, Hernandez CF, Abdulai F, Iwaki H, Bardien S, Klein C, Hardy J, Houlden H, Galvelis KG, Nalls MA, Dahodwala N, Aamodt W, Hill E, Espay A, Factor S, Branson C, Blauwendraat C, Singleton AB, Ojo O, Chahine LM; Black and African A… See abstract for full author list ➔ Akçimen F, et al. Among authors: koretsky mj. medRxiv [Preprint]. 2025 Jan 20:2025.01.14.25320205. doi: 10.1101/2025.01.14.25320205. medRxiv. 2025. PMID: 39867380 Free PMC article. Preprint.
Biobank-scale characterization of Alzheimer's disease and related dementias identifies potential disease-causing variants, risk factors, and genetic modifiers across diverse ancestries.
Khani M, Akçimen F, Grant SM, Akerman SC, Lee PS, Faghri F, Leonard H, Kim JJ, Makarious MB, Koretsky MJ, Rothstein JD, Blauwendraat C, Nalls MA, Singleton A, Bandres-Ciga S. Khani M, et al. Among authors: koretsky mj. medRxiv [Preprint]. 2024 Nov 17:2024.11.03.24313587. doi: 10.1101/2024.11.03.24313587. medRxiv. 2024. PMID: 39606324 Free PMC article. Preprint.
Genetic Contributions to Alzheimer's Disease and Frontotemporal Dementia in Admixed Latin American Populations.
Acosta-Uribe J, Piña Escudero SD, Cochran JN, Taylor JW, Castruita PA, Jonson C, Barinaga EA, Roberts K, Levine AR, George DS, ÁvilaFunes JA, Behrens MI, Bruno MA, Brusco LI, Custodio N, Duran-Aniotz C, Lopera F, Matallana DL, Slachevsky A, Takada LT, Zapata-Restrepo LM, Durón-Reyes DE, de Paula França Resende E, Gelvez N, Godoy ME, Maito MA, Javandel S, Miller BL, Nalls MA, Leonard H, Vitale D, Bandres-Ciga S, Koretsky MJ, Singleton AB, Pantazis CB, Valcour V, Ibañez A, Kosik KS, Yokoyama JS; Multi-Partner Consortium to Expand Dementia Research in Latin America (ReDLat). Acosta-Uribe J, et al. Among authors: koretsky mj. medRxiv [Preprint]. 2024 Nov 1:2024.10.29.24315197. doi: 10.1101/2024.10.29.24315197. medRxiv. 2024. PMID: 39574875 Free PMC article. Preprint.
GenoTools: an open-source Python package for efficient genotype data quality control and analysis.
Vitale D, Koretsky MJ, Kuznetsov N, Hong S, Martin J, James M, Makarious MB, Leonard H, Iwaki H, Faghri F, Blauwendraat C, Singleton AB, Song Y, Levine K, Kumar-Sreelatha AA, Fang ZH, Nalls M. Vitale D, et al. Among authors: koretsky mj. G3 (Bethesda). 2025 Jan 8;15(1):jkae268. doi: 10.1093/g3journal/jkae268. G3 (Bethesda). 2025. PMID: 39566101 Free PMC article.
A new AI-assisted data standard accelerates interoperability in biomedical research.
Long RA, Ballard S, Shah S, Bianchi O, Jones L, Koretsky MJ, Kuznetsov N, Marsan E, Jen B, Chiang P, Mukherjee A, Blauwendraat C, Leonard H, Vitale D, Levine K, Bandres-Ciga S, Jarreau P, Brannelly P, Pantazis C, Screven L, Andersh K, Kapasi A, Crary JF, Gutman D, Dugger BN, Biber S, Hohman T, Faghri F, Griswold M, Sargent L, van Keuren-Jensen K, Singleton AB, Fann Y, Nalls MA, Iwaki H. Long RA, et al. Among authors: koretsky mj. medRxiv [Preprint]. 2024 Nov 7:2024.10.17.24315618. doi: 10.1101/2024.10.17.24315618. medRxiv. 2024. PMID: 39484274 Free PMC article. Preprint.
NeuroBooster Array: A Genome-Wide Genotyping Platform to Study Neurological Disorders Across Diverse Populations.
Bandres-Ciga S, Faghri F, Majounie E, Koretsky MJ, Kim J, Levine KS, Leonard H, Makarious MB, Iwaki H, Crea PW, Hernandez DG, Arepalli S, Billingsley K, Lohmann K, Klein C, Lubbe SJ, Jabbari E, Saffie-Awad P, Narendra D, Reyes-Palomares A, Quinn JP, Schulte C, Morris HR, Traynor BJ, Scholz SW, Houlden H, Hardy J, Dumanis S, Riley E, Blauwendraat C, Singleton A, Nalls M, Jeff J, Vitale D; Global Parkinson's Genetics Program (GP2) and the Center for Alzheimer's and Related Dementias (CARD). Bandres-Ciga S, et al. Among authors: koretsky mj. Mov Disord. 2024 Nov;39(11):2039-2048. doi: 10.1002/mds.29902. Epub 2024 Sep 16. Mov Disord. 2024. PMID: 39283294
19 results