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A global comparison of surface and subsurface microbiomes reveals large-scale biodiversity gradients, and a marine-terrestrial divide.
Ruff SE, de Angelis IH, Mullis M, Payet JP, Magnabosco C, Lloyd KG, Sheik CS, Steen AD, Shipunova A, Morozov A, Reese BK, Bradley JA, Lemonnier C, Schrenk MO, Joye SB, Huber JA, Probst AJ, Morrison HG, Sogin ML, Ladau J, Colwell F. Ruff SE, et al. Among authors: magnabosco c. Sci Adv. 2024 Dec 20;10(51):eadq0645. doi: 10.1126/sciadv.adq0645. Epub 2024 Dec 18. Sci Adv. 2024. PMID: 39693444 Free PMC article.
A genomic catalog of Earth's microbiomes.
Nayfach S, Roux S, Seshadri R, Udwary D, Varghese N, Schulz F, Wu D, Paez-Espino D, Chen IM, Huntemann M, Palaniappan K, Ladau J, Mukherjee S, Reddy TBK, Nielsen T, Kirton E, Faria JP, Edirisinghe JN, Henry CS, Jungbluth SP, Chivian D, Dehal P, Wood-Charlson EM, Arkin AP, Tringe SG, Visel A; IMG/M Data Consortium; Woyke T, Mouncey NJ, Ivanova NN, Kyrpides NC, Eloe-Fadrosh EA. Nayfach S, et al. Nat Biotechnol. 2021 Apr;39(4):499-509. doi: 10.1038/s41587-020-0718-6. Epub 2020 Nov 9. Nat Biotechnol. 2021. PMID: 33169036 Free PMC article.
Phylogeny and phylogeography of functional genes shared among seven terrestrial subsurface metagenomes reveal N-cycling and microbial evolutionary relationships.
Lau MC, Cameron C, Magnabosco C, Brown CT, Schilkey F, Grim S, Hendrickson S, Pullin M, Sherwood Lollar B, van Heerden E, Kieft TL, Onstott TC. Lau MC, et al. Among authors: magnabosco c. Front Microbiol. 2014 Oct 31;5:531. doi: 10.3389/fmicb.2014.00531. eCollection 2014. Front Microbiol. 2014. PMID: 25400621 Free PMC article.
Author Correction: A genomic catalog of Earth's microbiomes.
Nayfach S, Roux S, Seshadri R, Udwary D, Varghese N, Schulz F, Wu D, Paez-Espino D, Chen IM, Huntemann M, Palaniappan K, Ladau J, Mukherjee S, Reddy TBK, Nielsen T, Kirton E, Faria JP, Edirisinghe JN, Henry CS, Jungbluth SP, Chivian D, Dehal P, Wood-Charlson EM, Arkin AP, Tringe SG, Visel A; IMG/M Data Consortium; Woyke T, Mouncey NJ, Ivanova NN, Kyrpides NC, Eloe-Fadrosh EA. Nayfach S, et al. Nat Biotechnol. 2021 Apr;39(4):521. doi: 10.1038/s41587-021-00898-4. Nat Biotechnol. 2021. PMID: 33795890 Free PMC article. No abstract available.
Publisher Correction: A genomic catalog of Earth's microbiomes.
Nayfach S, Roux S, Seshadri R, Udwary D, Varghese N, Schulz F, Wu D, Paez-Espino D, Chen IM, Huntemann M, Palaniappan K, Ladau J, Mukherjee S, Reddy TBK, Nielsen T, Kirton E, Faria JP, Edirisinghe JN, Henry CS, Jungbluth SP, Chivian D, Dehal P, Wood-Charlson EM, Arkin AP, Tringe SG, Visel A; IMG/M Data Consortium; Woyke T, Mouncey NJ, Ivanova NN, Kyrpides NC, Eloe-Fadrosh EA. Nayfach S, et al. Nat Biotechnol. 2021 Apr;39(4):520. doi: 10.1038/s41587-020-00769-4. Nat Biotechnol. 2021. PMID: 33208936 Free PMC article. No abstract available.
An oligotrophic deep-subsurface community dependent on syntrophy is dominated by sulfur-driven autotrophic denitrifiers.
Lau MC, Kieft TL, Kuloyo O, Linage-Alvarez B, van Heerden E, Lindsay MR, Magnabosco C, Wang W, Wiggins JB, Guo L, Perlman DH, Kyin S, Shwe HH, Harris RL, Oh Y, Yi MJ, Purtschert R, Slater GF, Ono S, Wei S, Li L, Sherwood Lollar B, Onstott TC. Lau MC, et al. Among authors: magnabosco c. Proc Natl Acad Sci U S A. 2016 Dec 6;113(49):E7927-E7936. doi: 10.1073/pnas.1612244113. Epub 2016 Nov 21. Proc Natl Acad Sci U S A. 2016. PMID: 27872277 Free PMC article.
55 results