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Author Correction: Frequency and spectrum of mutations in human sperm measured using duplex sequencing correlate with trio-based de novo mutation analyses.
Axelsson J, LeBlanc D, Shojaeisaadi H, Meier MJ, Fitzgerald DM, Nachmanson D, Carlson J, Golubeva A, Higgins J, Smith T, Lo FY, Pilsner R, Williams A, Salk J, Marchetti F, Yauk C. Axelsson J, et al. Among authors: salk j. Sci Rep. 2024 Dec 19;14(1):30571. doi: 10.1038/s41598-024-82618-x. Sci Rep. 2024. PMID: 39702384 Free PMC article. No abstract available.
Error-corrected duplex sequencing enables direct detection and quantification of mutations in human TK6 cells with strong inter-laboratory consistency.
Cho E, Swartz CD, Williams A, V Rivas M, Recio L, Witt KL, Schmidt EK, Yaplee J, Smith TH, Van P, Lo FY, Valentine CC 3rd, Salk JJ, Marchetti F, Smith-Roe SL, Yauk CL. Cho E, et al. Among authors: salk jj. Mutat Res Genet Toxicol Environ Mutagen. 2023 Jul;889:503649. doi: 10.1016/j.mrgentox.2023.503649. Epub 2023 May 20. Mutat Res Genet Toxicol Environ Mutagen. 2023. PMID: 37491114 Free PMC article.
Dose-Related Mutagenic and Clastogenic Effects of Benzo[b]fluoranthene in Mouse Somatic Tissues Detected by Duplex Sequencing and the Micronucleus Assay.
Schuster DM, LeBlanc DPM, Zhou G, Meier MJ, Dodge AE, White PA, Long AS, Williams A, Hobbs C, Diesing A, Smith-Roe SL, Salk JJ, Marchetti F, Yauk CL. Schuster DM, et al. Among authors: salk jj. Environ Sci Technol. 2024 Dec 10;58(49):21450-21463. doi: 10.1021/acs.est.4c07236. Epub 2024 Nov 27. Environ Sci Technol. 2024. PMID: 39602390 Free PMC article.
Adopting duplex sequencing technology for genetic toxicity testing: A proof-of-concept mutagenesis experiment with N-ethyl-N-nitrosourea (ENU)-exposed rats.
Smith-Roe SL, Hobbs CA, Hull V, Todd Auman J, Recio L, Streicker MA, Rivas MV, Pratt GA, Lo FY, Higgins JE, Schmidt EK, Williams LN, Nachmanson D, Valentine Iii CC, Salk JJ, Witt KL. Smith-Roe SL, et al. Among authors: salk jj. Mutat Res Genet Toxicol Environ Mutagen. 2023 Oct;891:503669. doi: 10.1016/j.mrgentox.2023.503669. Epub 2023 Aug 3. Mutat Res Genet Toxicol Environ Mutagen. 2023. PMID: 37770135 Free PMC article.
Error-corrected next generation sequencing - Promises and challenges for genotoxicity and cancer risk assessment.
Marchetti F, Cardoso R, Chen CL, Douglas GR, Elloway J, Escobar PA, Harper T Jr, Heflich RH, Kidd D, Lynch AM, Myers MB, Parsons BL, Salk JJ, Settivari RS, Smith-Roe SL, Witt KL, Yauk CL, Young R, Zhang S, Minocherhomji S. Marchetti F, et al. Among authors: salk jj. Mutat Res Rev Mutat Res. 2023 Jul-Dec;792:108466. doi: 10.1016/j.mrrev.2023.108466. Epub 2023 Aug 27. Mutat Res Rev Mutat Res. 2023. PMID: 37643677 Free article. Review.
Error-corrected next-generation sequencing to advance nonclinical genotoxicity and carcinogenicity testing.
Marchetti F, Cardoso R, Chen CL, Douglas GR, Elloway J, Escobar PA, Harper T Jr, Heflich RH, Kidd D, Lynch AM, Myers MB, Parsons BL, Salk JJ, Settivari RS, Smith-Roe SL, Witt KL, Yauk C, Young RR, Zhang S, Minocherhomji S. Marchetti F, et al. Among authors: salk jj. Nat Rev Drug Discov. 2023 Mar;22(3):165-166. doi: 10.1038/d41573-023-00014-y. Nat Rev Drug Discov. 2023. PMID: 36646809 No abstract available.
Liver-on-chip model and application in predictive genotoxicity and mutagenicity of drugs.
Kopp B, Khawam A, Di Perna K, Lenart D, Vinette M, Silva R, Zanoni TB, Rore C, Guenigault G, Richardson E, Kostrzewski T, Boswell A, Van P, Valentine Iii C, Salk J, Hamel A. Kopp B, et al. Among authors: salk j. Mutat Res Genet Toxicol Environ Mutagen. 2024 May-Jun;896:503762. doi: 10.1016/j.mrgentox.2024.503762. Epub 2024 Apr 11. Mutat Res Genet Toxicol Environ Mutagen. 2024. PMID: 38821675
Mitochondrial haplotype and mito-nuclear matching drive somatic mutation and selection throughout aging.
Serrano IM, Hirose M, Valentine CC, Roesner S, Schmidt E, Pratt G, Williams L, Salk J, Ibrahim S, Sudmant PH. Serrano IM, et al. Among authors: salk j. bioRxiv [Preprint]. 2023 Oct 23:2023.03.06.531392. doi: 10.1101/2023.03.06.531392. bioRxiv. 2023. Update in: Nat Ecol Evol. 2024 May;8(5):1021-1034. doi: 10.1038/s41559-024-02338-3 PMID: 36945529 Free PMC article. Updated. Preprint.
Characterization of clonal dynamics using duplex sequencing in donor-recipient pairs decades after hematopoietic cell transplantation.
Oshima MU, Higgins J, Jenkins I, Randolph T, Smith T, Valentine C 3rd, Salk J, Yeung C, Beppu L, Campbell J, Carpenter PA, Lee SJ, Flowers ME, Radich JP, Storb R. Oshima MU, et al. Among authors: salk j. Sci Transl Med. 2024 Oct 23;16(770):eado5108. doi: 10.1126/scitranslmed.ado5108. Epub 2024 Oct 23. Sci Transl Med. 2024. PMID: 39441907
191 results