Liu ZP - Search Results

1

Structure-Based Prediction of lncRNA-Protein Interactions by Deep Learning.

Li P, Liu ZP. Li P, et al. Among authors: liu zp. Methods Mol Biol. 2025;2883:363-376. doi: 10.1007/978-1-0716-4290-0_16. Methods Mol Biol. 2025. PMID: 39702717

2

PST-PRNA: prediction of RNA-binding sites using protein surface topography and deep learning.

Li P, Liu ZP. Li P, et al. Among authors: liu zp. Bioinformatics. 2022 Apr 12;38(8):2162-2168. doi: 10.1093/bioinformatics/btac078. Bioinformatics. 2022. PMID: 35150250

3

Drug-target Affinity Prediction by Molecule Secondary Structure Representation Network.

Tang Y, Li Y, Li P, Liu ZP. Tang Y, et al. Among authors: liu zp. Curr Med Chem. 2024 Feb 22. doi: 10.2174/0109298673252287240215103035. Online ahead of print. Curr Med Chem. 2024. PMID: 38409701

4

Early Progression of Abdominal Aortic Aneurysm is Decelerated by Improved Endothelial Barrier Function via ALDH2-LIN28B-ELK3 Signaling.

Yang K, Cui S, Wang J, Xu T, Du H, Yue H, Ye H, Guo J, Zhang J, Li P, Guo Y, Pan C, Pang J, Wang J, Yu X, Zhang C, Liu Z, Chen Y, Xu F. Yang K, et al. Adv Sci (Weinh). 2023 Nov;10(32):e2302231. doi: 10.1002/advs.202302231. Epub 2023 Oct 11. Adv Sci (Weinh). 2023. PMID: 37822152 Free PMC article.

5

TopMarker: Computational screening biomarkers of hepatocellular carcinoma from transcriptome and interactome based on differential network topological parameters.

Wang Y, Wang T, Cao Y, Qiao X, Han X, Liu ZP. Wang Y, et al. Among authors: liu zp. Comput Biol Chem. 2024 Oct;112:108166. doi: 10.1016/j.compbiolchem.2024.108166. Epub 2024 Aug 2. Comput Biol Chem. 2024. PMID: 39111022

6

Discovering explainable biomarkers for breast cancer anti-PD1 response via network Shapley value analysis.

Sun C, Liu ZP. Sun C, et al. Among authors: liu zp. Comput Methods Programs Biomed. 2024 Dec;257:108481. doi: 10.1016/j.cmpb.2024.108481. Epub 2024 Oct 26. Comput Methods Programs Biomed. 2024. PMID: 39488042

7

Gene essentiality prediction based on fractal features and machine learning.

Yu Y, Yang L, Liu Z, Zhu C. Yu Y, et al. Mol Biosyst. 2017 Feb 28;13(3):577-584. doi: 10.1039/c6mb00806b. Mol Biosyst. 2017. PMID: 28145541

8

PKI: A bioinformatics method of quantifying the importance of nodes in gene regulatory network via a pseudo knockout index.

Wang Y, Liu C, Qiao X, Han X, Liu ZP. Wang Y, et al. Among authors: liu zp, liu c. Biochim Biophys Acta Gene Regul Mech. 2023 Jun;1866(2):194911. doi: 10.1016/j.bbagrm.2023.194911. Epub 2023 Feb 16. Biochim Biophys Acta Gene Regul Mech. 2023. PMID: 36804477

9

Graph attention network for link prediction of gene regulations from single-cell RNA-sequencing data.

Chen G, Liu ZP. Chen G, et al. Among authors: liu zp. Bioinformatics. 2022 Sep 30;38(19):4522-4529. doi: 10.1093/bioinformatics/btac559. Bioinformatics. 2022. PMID: 35961023

10

DeepSAP: A Novel Brain Image-Based Deep Learning Model for Predicting Stroke-Associated Pneumonia From Spontaneous Intracerebral Hemorrhage.

Qiao X, Lu C, Xu M, Yang G, Chen W, Liu Z. Qiao X, et al. Acad Radiol. 2024 Dec;31(12):5193-5203. doi: 10.1016/j.acra.2024.06.025. Epub 2024 Jul 2. Acad Radiol. 2024. PMID: 38955592 Free article.

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