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QOT: Efficient Computation of Sample Level Distance Matrix from Single-Cell Omics Data through Quantized Optimal Transport.
Wang Z, Zhan Q, Yang S, Mu S, Chen J, Garai S, Orzechowski P, Wagenaar J, Shen L. Wang Z, et al. Among authors: garai s. bioRxiv [Preprint]. 2024 Feb 6:2024.02.06.578032. doi: 10.1101/2024.02.06.578032. bioRxiv. 2024. Update in: Brief Bioinform. 2024 Nov 22;26(1):bbae713. doi: 10.1093/bib/bbae713 PMID: 38370767 Free PMC article. Updated. Preprint.
Automated Cytometric Gating with Human-Level Performance Using Bivariate Segmentation.
Chen J, Ionita M, Feng Y, Lu Y, Orzechowski P, Garai S, Hassinger K, Bao J, Wen J, Duong-Tran D, Wagenaar J, McKeague ML, Painter MM, Mathew D, Pattekar A, Meyer NJ, Wherry EJ, Greenplate AR, Shen L. Chen J, et al. Among authors: garai s. bioRxiv [Preprint]. 2024 May 9:2024.05.06.592739. doi: 10.1101/2024.05.06.592739. bioRxiv. 2024. PMID: 38766268 Free PMC article. Preprint.
Homological landscape of human brain functional sub-circuits.
Duong-Tran D, Kaufmann R, Chen J, Wang X, Garai S, Xu F, Bao J, Amico E, Kaplan AD, Petri G, Goni J, Zhao Y, Shen L. Duong-Tran D, et al. Among authors: garai s. bioRxiv [Preprint]. 2023 Dec 22:2023.12.22.573062. doi: 10.1101/2023.12.22.573062. bioRxiv. 2023. PMID: 38187668 Free PMC article. Preprint.
131 results