Karlin S - Search Results

1

Strand compositional asymmetry in bacterial and large viral genomes.

Mrázek J, Karlin S. Mrázek J, et al. Among authors: karlin s. Proc Natl Acad Sci U S A. 1998 Mar 31;95(7):3720-5. doi: 10.1073/pnas.95.7.3720. Proc Natl Acad Sci U S A. 1998. PMID: 9520433 Free PMC article.

2

Amino acid runs in eukaryotic proteomes and disease associations.

Karlin S, Brocchieri L, Bergman A, Mrazek J, Gentles AJ. Karlin S, et al. Proc Natl Acad Sci U S A. 2002 Jan 8;99(1):333-8. doi: 10.1073/pnas.012608599. Proc Natl Acad Sci U S A. 2002. PMID: 11782551 Free PMC article.

3

Frequent oligonucleotide motifs in genomes of three streptococci.

Mrázek J, Gaynon LH, Karlin S. Mrázek J, et al. Among authors: karlin s. Nucleic Acids Res. 2002 Oct 1;30(19):4216-21. doi: 10.1093/nar/gkf534. Nucleic Acids Res. 2002. PMID: 12364600 Free PMC article.

4

Predicting gene expression levels from codon biases in alpha-proteobacterial genomes.

Karlin S, Barnett MJ, Campbell AM, Fisher RF, Mrazek J. Karlin S, et al. Proc Natl Acad Sci U S A. 2003 Jun 10;100(12):7313-8. doi: 10.1073/pnas.1232298100. Epub 2003 May 29. Proc Natl Acad Sci U S A. 2003. PMID: 12775761 Free PMC article.

5

Comparative analysis of gene expression among low G+C gram-positive genomes.

Karlin S, Theriot J, Mrázek J. Karlin S, et al. Proc Natl Acad Sci U S A. 2004 Apr 20;101(16):6182-7. doi: 10.1073/pnas.0401504101. Epub 2004 Apr 6. Proc Natl Acad Sci U S A. 2004. PMID: 15069198 Free PMC article.

6

Genomic and proteomic comparisons between bacterial and archaeal genomes and related comparisons with the yeast and fly genomes.

Karlin S, Brocchieri L, Campbell A, Cyert M, Mrázek J. Karlin S, et al. Proc Natl Acad Sci U S A. 2005 May 17;102(20):7309-14. doi: 10.1073/pnas.0502314102. Epub 2005 May 9. Proc Natl Acad Sci U S A. 2005. PMID: 15883367 Free PMC article.

7

Predicted highly expressed genes in archaeal genomes.

Karlin S, Mrázek J, Ma J, Brocchieri L. Karlin S, et al. Proc Natl Acad Sci U S A. 2005 May 17;102(20):7303-8. doi: 10.1073/pnas.0502313102. Epub 2005 May 9. Proc Natl Acad Sci U S A. 2005. PMID: 15883368 Free PMC article.

8

Distinguishing features of delta-proteobacterial genomes.

Karlin S, Brocchieri L, Mrázek J, Kaiser D. Karlin S, et al. Proc Natl Acad Sci U S A. 2006 Jul 25;103(30):11352-7. doi: 10.1073/pnas.0604311103. Epub 2006 Jul 14. Proc Natl Acad Sci U S A. 2006. PMID: 16844781 Free PMC article.

9

Distinctive features of large complex virus genomes and proteomes.

Mrázek J, Karlin S. Mrázek J, et al. Among authors: karlin s. Proc Natl Acad Sci U S A. 2007 Mar 20;104(12):5127-32. doi: 10.1073/pnas.0700429104. Epub 2007 Mar 9. Proc Natl Acad Sci U S A. 2007. PMID: 17360339 Free PMC article.

10

Compositional biases of bacterial genomes and evolutionary implications.

Karlin S, Mrázek J, Campbell AM. Karlin S, et al. J Bacteriol. 1997 Jun;179(12):3899-913. doi: 10.1128/jb.179.12.3899-3913.1997. J Bacteriol. 1997. PMID: 9190805 Free PMC article.

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