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Testing for the existence of clusters.
Fuentes C, Casella G. Fuentes C, et al. Sort (Barc). 2009 Jul;33(2):115-157. Sort (Barc). 2009. PMID: 21966296 Free PMC article.
PANGEA: pipeline for analysis of next generation amplicons.
Giongo A, Crabb DB, Davis-Richardson AG, Chauliac D, Mobberley JM, Gano KA, Mukherjee N, Casella G, Roesch LF, Walts B, Riva A, King G, Triplett EW. Giongo A, et al. ISME J. 2010 Jul;4(7):852-61. doi: 10.1038/ismej.2010.16. Epub 2010 Feb 25. ISME J. 2010. PMID: 20182525 Free PMC article.
Pyrosequencing enumerates and contrasts soil microbial diversity.
Roesch LF, Fulthorpe RR, Riva A, Casella G, Hadwin AK, Kent AD, Daroub SH, Camargo FA, Farmerie WG, Triplett EW. Roesch LF, et al. ISME J. 2007 Aug;1(4):283-90. doi: 10.1038/ismej.2007.53. Epub 2007 Jul 5. ISME J. 2007. PMID: 18043639 Free PMC article.