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2009 5
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2024 0

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Page 1
A framework for oligonucleotide microarray preprocessing.
Carvalho BS, Irizarry RA. Carvalho BS, et al. Bioinformatics. 2010 Oct 1;26(19):2363-7. doi: 10.1093/bioinformatics/btq431. Epub 2010 Aug 5. Bioinformatics. 2010. PMID: 20688976 Free PMC article.
Gene set enrichment analysis made simple.
Irizarry RA, Wang C, Zhou Y, Speed TP. Irizarry RA, et al. Stat Methods Med Res. 2009 Dec;18(6):565-75. doi: 10.1177/0962280209351908. Stat Methods Med Res. 2009. PMID: 20048385 Free PMC article.
Performance assessment of copy number microarray platforms using a spike-in experiment.
Halper-Stromberg E, Frelin L, Ruczinski I, Scharpf R, Jie C, Carvalho B, Hao H, Hetrick K, Jedlicka A, Dziedzic A, Doheny K, Scott AF, Baylin S, Pevsner J, Spencer F, Irizarry RA. Halper-Stromberg E, et al. Bioinformatics. 2011 Apr 15;27(8):1052-60. doi: 10.1093/bioinformatics/btr106. Bioinformatics. 2011. PMID: 21478196 Free PMC article.
Epigenetic memory in induced pluripotent stem cells.
Kim K, Doi A, Wen B, Ng K, Zhao R, Cahan P, Kim J, Aryee MJ, Ji H, Ehrlich LI, Yabuuchi A, Takeuchi A, Cunniff KC, Hongguang H, McKinney-Freeman S, Naveiras O, Yoon TJ, Irizarry RA, Jung N, Seita J, Hanna J, Murakami P, Jaenisch R, Weissleder R, Orkin SH, Weissman IL, Feinberg AP, Daley GQ. Kim K, et al. Nature. 2010 Sep 16;467(7313):285-90. doi: 10.1038/nature09342. Nature. 2010. PMID: 20644535 Free PMC article.
Frozen robust multiarray analysis (fRMA).
McCall MN, Bolstad BM, Irizarry RA. McCall MN, et al. Biostatistics. 2010 Apr;11(2):242-53. doi: 10.1093/biostatistics/kxp059. Epub 2010 Jan 22. Biostatistics. 2010. PMID: 20097884 Free PMC article.
Quantifying uncertainty in genotype calls.
Carvalho BS, Louis TA, Irizarry RA. Carvalho BS, et al. Bioinformatics. 2010 Jan 15;26(2):242-9. doi: 10.1093/bioinformatics/btp624. Epub 2009 Nov 11. Bioinformatics. 2010. PMID: 19906825 Free PMC article.
22 results