R01GM079686/GM/NIGMS NIH HHS/United States[Grants and Funding] - Search Results

Year	Number of Results
2008	3
2009	2
2010	3
2011	3
2012	3
2013	2
2025	0

1

Exploring the relationship between sequences, structures, dynamical behaviors and functions of new type protein drugs: DARPins.

Wu X, Shi Y, Ren P, Wang D, Li G. Wu X, et al. Curr Pharm Des. 2013;19(12):2308-17. doi: 10.2174/1381612811319120017. Curr Pharm Des. 2013. PMID: 23082980 Review.

2

Role of bivalent cations in structural stabilities of new drug targets--vaccinia-related kinases (VRK) from molecular dynamics simulations.

Fu T, Ren H, Zhang J, Ren P, Enyedy I, Li G. Fu T, et al. Curr Pharm Des. 2013;19(12):2269-81. doi: 10.2174/1381612811319120014. Curr Pharm Des. 2013. PMID: 23082977 Review.

3

Computational insights for the discovery of non-ATP competitive inhibitors of MAP kinases.

Schnieders MJ, Kaoud TS, Yan C, Dalby KN, Ren P. Schnieders MJ, et al. Curr Pharm Des. 2012;18(9):1173-85. doi: 10.2174/138161212799436368. Curr Pharm Des. 2012. PMID: 22316156 Free PMC article. Review.

4

Understanding the specificity of a docking interaction between JNK1 and the scaffolding protein JIP1.

Yan C, Kaoud T, Lee S, Dalby KN, Ren P. Yan C, et al. J Phys Chem B. 2011 Feb 17;115(6):1491-502. doi: 10.1021/jp1073522. Epub 2011 Jan 25. J Phys Chem B. 2011. PMID: 21261310 Free PMC article.

5

Gay-Berne and electrostatic multipole based coarse-grain potential in implicit solvent.

Wu J, Zhen X, Shen H, Li G, Ren P. Wu J, et al. J Chem Phys. 2011 Oct 21;135(15):155104. doi: 10.1063/1.3651626. J Chem Phys. 2011. PMID: 22029338 Free PMC article.

6

Manipulating JNK signaling with (--)-zuonin A.

Kaoud TS, Park H, Mitra S, Yan C, Tseng CC, Shi Y, Jose J, Taliaferro JM, Lee K, Ren P, Hong J, Dalby KN. Kaoud TS, et al. ACS Chem Biol. 2012 Nov 16;7(11):1873-83. doi: 10.1021/cb300261e. Epub 2012 Aug 30. ACS Chem Biol. 2012. PMID: 22916726 Free PMC article.

7

Substrate specificity of human kallikreins 1 and 6 determined by phage display.

Li HX, Hwang BY, Laxmikanthan G, Blaber SI, Blaber M, Golubkov PA, Ren P, Iverson BL, Georgiou G. Li HX, et al. Protein Sci. 2008 Apr;17(4):664-72. doi: 10.1110/ps.073333208. Protein Sci. 2008. PMID: 18359858 Free PMC article.

8

Correlation of RNA secondary structure statistics with thermodynamic stability and applications to folding.

Wu JC, Gardner DP, Ozer S, Gutell RR, Ren P. Wu JC, et al. J Mol Biol. 2009 Aug 28;391(4):769-83. doi: 10.1016/j.jmb.2009.06.036. Epub 2009 Jun 18. J Mol Biol. 2009. PMID: 19540243 Free PMC article.

9

Current status of the AMOEBA polarizable force field.

Ponder JW, Wu C, Ren P, Pande VS, Chodera JD, Schnieders MJ, Haque I, Mobley DL, Lambrecht DS, DiStasio RA Jr, Head-Gordon M, Clark GN, Johnson ME, Head-Gordon T. Ponder JW, et al. J Phys Chem B. 2010 Mar 4;114(8):2549-64. doi: 10.1021/jp910674d. J Phys Chem B. 2010. PMID: 20136072 Free PMC article.

10

Multipole electrostatics in hydration free energy calculations.

Shi Y, Wu C, Ponder JW, Ren P. Shi Y, et al. J Comput Chem. 2011 Apr 15;32(5):967-77. doi: 10.1002/jcc.21681. Epub 2010 Oct 5. J Comput Chem. 2011. PMID: 20925089 Free PMC article.

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