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Segmented correspondence curve regression for quantifying covariate effects on the reproducibility of high-throughput experiments.
Biometrics. 2023 Sep;79(3):2272-2285. doi: 10.1111/biom.13757. Epub 2022 Sep 19.
Biometrics. 2023.
PMID: 36056911
Measuring the reproducibility and quality of Hi-C data.
Yardımcı GG, Ozadam H, Sauria MEG, Ursu O, Yan KK, Yang T, Chakraborty A, Kaul A, Lajoie BR, Song F, Zhan Y, Ay F, Gerstein M, Kundaje A, Li Q, Taylor J, Yue F, Dekker J, Noble WS.
Yardımcı GG, et al.
Genome Biol. 2019 Mar 19;20(1):57. doi: 10.1186/s13059-019-1658-7.
Genome Biol. 2019.
PMID: 30890172
Free PMC article.
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A semi-parametric statistical model for integrating gene expression profiles across different platforms.
Lyu Y, Li Q.
Lyu Y, et al.
BMC Bioinformatics. 2016 Jan 11;17 Suppl 1(Suppl 1):5. doi: 10.1186/s12859-015-0847-y.
BMC Bioinformatics. 2016.
PMID: 26818110
Free PMC article.
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