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Year Number of Results
2007 1
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Page 1
Visualizing GO Annotations.
Supek F, Škunca N. Supek F, et al. Among authors: skunca n. Methods Mol Biol. 2017;1446:207-220. doi: 10.1007/978-1-4939-3743-1_15. Methods Mol Biol. 2017. PMID: 27812945
Big data and other challenges in the quest for orthologs.
Sonnhammer EL, Gabaldón T, Sousa da Silva AW, Martin M, Robinson-Rechavi M, Boeckmann B, Thomas PD, Dessimoz C; Quest for Orthologs consortium. Sonnhammer EL, et al. Bioinformatics. 2014 Nov 1;30(21):2993-8. doi: 10.1093/bioinformatics/btu492. Epub 2014 Jul 26. Bioinformatics. 2014. PMID: 25064571 Free PMC article.
Inferring horizontal gene transfer.
Ravenhall M, Škunca N, Lassalle F, Dessimoz C. Ravenhall M, et al. Among authors: skunca n. PLoS Comput Biol. 2015 May 28;11(5):e1004095. doi: 10.1371/journal.pcbi.1004095. eCollection 2015 May. PLoS Comput Biol. 2015. PMID: 26020646 Free PMC article.
Primer on the Gene Ontology.
Gaudet P, Škunca N, Hu JC, Dessimoz C. Gaudet P, et al. Among authors: skunca n. Methods Mol Biol. 2017;1446:25-37. doi: 10.1007/978-1-4939-3743-1_3. Methods Mol Biol. 2017. PMID: 27812933 Free PMC article.
Translational selection is ubiquitous in prokaryotes.
Supek F, Skunca N, Repar J, Vlahovicek K, Smuc T. Supek F, et al. Among authors: skunca n. PLoS Genet. 2010 Jun 24;6(6):e1001004. doi: 10.1371/journal.pgen.1001004. PLoS Genet. 2010. PMID: 20585573 Free PMC article.
Toward community standards in the quest for orthologs.
Dessimoz C, Gabaldón T, Roos DS, Sonnhammer EL, Herrero J; Quest for Orthologs Consortium. Dessimoz C, et al. Bioinformatics. 2012 Mar 15;28(6):900-4. doi: 10.1093/bioinformatics/bts050. Epub 2012 Feb 12. Bioinformatics. 2012. PMID: 22332236 Free PMC article.
A large-scale evaluation of computational protein function prediction.
Radivojac P, Clark WT, Oron TR, Schnoes AM, Wittkop T, Sokolov A, Graim K, Funk C, Verspoor K, Ben-Hur A, Pandey G, Yunes JM, Talwalkar AS, Repo S, Souza ML, Piovesan D, Casadio R, Wang Z, Cheng J, Fang H, Gough J, Koskinen P, Törönen P, Nokso-Koivisto J, Holm L, Cozzetto D, Buchan DW, Bryson K, Jones DT, Limaye B, Inamdar H, Datta A, Manjari SK, Joshi R, Chitale M, Kihara D, Lisewski AM, Erdin S, Venner E, Lichtarge O, Rentzsch R, Yang H, Romero AE, Bhat P, Paccanaro A, Hamp T, Kaßner R, Seemayer S, Vicedo E, Schaefer C, Achten D, Auer F, Boehm A, Braun T, Hecht M, Heron M, Hönigschmid P, Hopf TA, Kaufmann S, Kiening M, Krompass D, Landerer C, Mahlich Y, Roos M, Björne J, Salakoski T, Wong A, Shatkay H, Gatzmann F, Sommer I, Wass MN, Sternberg MJ, Škunca N, Supek F, Bošnjak M, Panov P, Džeroski S, Šmuc T, Kourmpetis YA, van Dijk AD, ter Braak CJ, Zhou Y, Gong Q, Dong X, Tian W, Falda M, Fontana P, Lavezzo E, Di Camillo B, Toppo S, Lan L, Djuric N, Guo Y, Vucetic S, Bairoch A, Linial M, Babbitt PC, Brenner SE, Orengo C, Rost B, Mooney SD, Friedberg I. Radivojac P, et al. Among authors: skunca n. Nat Methods. 2013 Mar;10(3):221-7. doi: 10.1038/nmeth.2340. Epub 2013 Jan 27. Nat Methods. 2013. PMID: 23353650 Free PMC article.
A transcriptomic-phylogenomic analysis of the evolutionary relationships of flatworms.
Egger B, Lapraz F, Tomiczek B, Müller S, Dessimoz C, Girstmair J, Škunca N, Rawlinson KA, Cameron CB, Beli E, Todaro MA, Gammoudi M, Noreña C, Telford MJ. Egger B, et al. Among authors: skunca n. Curr Biol. 2015 May 18;25(10):1347-53. doi: 10.1016/j.cub.2015.03.034. Epub 2015 Apr 9. Curr Biol. 2015. PMID: 25866392 Free PMC article.
22 results