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Showing results for aligns eb
Search for Alins EB instead (1 results)
Merged magnetic resonance and light sheet microscopy of the whole mouse brain.
Johnson GA, Tian Y, Ashbrook DG, Cofer GP, Cook JJ, Gee JC, Hall A, Hornburg K, Kaczorowski CC, Qi Y, Yeh FC, Wang N, White LE, Williams RW. Johnson GA, et al. Proc Natl Acad Sci U S A. 2023 Apr 25;120(17):e2218617120. doi: 10.1073/pnas.2218617120. Epub 2023 Apr 17. Proc Natl Acad Sci U S A. 2023. PMID: 37068254 Free PMC article.
We have developed workflows to align 3D magnetic resonance histology (MRH) of the mouse brain with light sheet microscopy (LSM) and 3D delineations of the same specimen. ...The result is a high-dimensional integrated volume with registration (HiDiver) with alignment …
We have developed workflows to align 3D magnetic resonance histology (MRH) of the mouse brain with light sheet microscopy (LSM) and 3 …
Respiration aligns perception with neural excitability.
Kluger DS, Balestrieri E, Busch NA, Gross J. Kluger DS, et al. Elife. 2021 Dec 14;10:e70907. doi: 10.7554/eLife.70907. Elife. 2021. PMID: 34904567 Free PMC article.
In line with interoceptive inference accounts, these results suggest that respiration actively aligns sampling of sensory information with transient cycles of heightened excitability to facilitate performance....
In line with interoceptive inference accounts, these results suggest that respiration actively aligns sampling of sensory information …
Aligning latent representations of neural activity.
Dabagia M, Kording KP, Dyer EL. Dabagia M, et al. Nat Biomed Eng. 2023 Apr;7(4):337-343. doi: 10.1038/s41551-022-00962-7. Nat Biomed Eng. 2023. PMID: 36443379 No abstract available.
Wafer-scale heterostructured piezoelectric bio-organic thin films.
Yang F, Li J, Long Y, Zhang Z, Wang L, Sui J, Dong Y, Wang Y, Taylor R, Ni D, Cai W, Wang P, Hacker T, Wang X. Yang F, et al. Science. 2021 Jul 16;373(6552):337-342. doi: 10.1126/science.abf2155. Science. 2021. PMID: 34437153 Free PMC article.
However, the inability to synthesize and align the piezoelectric phase at a large scale remains a roadblock toward practical applications. ...The thin film has a sandwich structure, where a crystalline glycine layer self-assembles and automatically aligns between tw …
However, the inability to synthesize and align the piezoelectric phase at a large scale remains a roadblock toward practical applicat …
Technology dictates algorithms: recent developments in read alignment.
Alser M, Rotman J, Deshpande D, Taraszka K, Shi H, Baykal PI, Yang HT, Xue V, Knyazev S, Singer BD, Balliu B, Koslicki D, Skums P, Zelikovsky A, Alkan C, Mutlu O, Mangul S. Alser M, et al. Genome Biol. 2021 Aug 26;22(1):249. doi: 10.1186/s13059-021-02443-7. Genome Biol. 2021. PMID: 34446078 Free PMC article. Review.
Computational algorithms for read alignment have evolved in accordance with technological advances, leading to today's diverse array of alignment methods. We provide a systematic survey of algorithmic foundations and methodologies across 107 alignment methods …
Computational algorithms for read alignment have evolved in accordance with technological advances, leading to today's diverse array …
Moving Electrospun Nanofibers and Bioprinted Scaffolds toward Translational Applications.
Wu T, Mo X, Xia Y. Wu T, et al. Adv Healthc Mater. 2020 Mar;9(6):e1901761. doi: 10.1002/adhm.201901761. Epub 2020 Jan 30. Adv Healthc Mater. 2020. PMID: 31999081 Free PMC article. Review.
Regarding biomedical applications, one can readily produce nanofiber-based scaffolds with controlled compositions, structures, alignments, and functions by varying the material, design of collector, number of spinnerets, and electrospinning parameters. ...
Regarding biomedical applications, one can readily produce nanofiber-based scaffolds with controlled compositions, structures, alignments …
Intensity warping for multisite MRI harmonization.
Wrobel J, Martin ML, Bakshi R, Calabresi PA, Elliot M, Roalf D, Gur RC, Gur RE, Henry RG, Nair G, Oh J, Papinutto N, Pelletier D, Reich DS, Rooney WD, Satterthwaite TD, Stern W, Prabhakaran K, Sicotte NL, Shinohara RT, Goldsmith J; NAIMS Cooperative. Wrobel J, et al. Neuroimage. 2020 Dec;223:117242. doi: 10.1016/j.neuroimage.2020.117242. Epub 2020 Aug 14. Neuroimage. 2020. PMID: 32798678 Free PMC article.
We propose mica (multisite image harmonization by cumulative distribution function alignment), a tool to harmonize images taken on different scanners by identifying and removing within-subject scanner effects. ...We found that unharmonized images were highly variable acros …
We propose mica (multisite image harmonization by cumulative distribution function alignment), a tool to harmonize images taken on di …
Membrane protein structure from rotational diffusion.
Das BB, Park SH, Opella SJ. Das BB, et al. Biochim Biophys Acta. 2015 Jan;1848(1 Pt B):229-45. doi: 10.1016/j.bbamem.2014.04.002. Epub 2014 Apr 18. Biochim Biophys Acta. 2015. PMID: 24747039 Free PMC article. Review.
The method is referred to as rotationally aligned (RA) solid-state NMR and demonstrated with results on full-length, unmodified membrane proteins with one, two, and seven trans-membrane helices. RA solid-state NMR is complementary to other solid-state NMR methods, in parti …
The method is referred to as rotationally aligned (RA) solid-state NMR and demonstrated with results on full-length, unmodified membr …
Cortical surface registration using unsupervised learning.
Cheng J, Dalca AV, Fischl B, Zöllei L; Alzheimer’s Disease Neuroimaging Initiative. Cheng J, et al. Neuroimage. 2020 Nov 1;221:117161. doi: 10.1016/j.neuroimage.2020.117161. Epub 2020 Jul 20. Neuroimage. 2020. PMID: 32702486 Free PMC article.
A conventional solution is to use a spherical representation of surface properties and perform registration by aligning cortical folding patterns in that space. This strategy produces accurate spatial alignment, but often requires high computational cost. ...We prop …
A conventional solution is to use a spherical representation of surface properties and perform registration by aligning cortical fold …
Enhanced hyperalignment via spatial prior information.
Andreella A, Finos L, Lindquist MA. Andreella A, et al. Hum Brain Mapp. 2023 Mar;44(4):1725-1740. doi: 10.1002/hbm.26170. Epub 2022 Dec 21. Hum Brain Mapp. 2023. PMID: 36541577 Free PMC article.
Functional alignment between subjects is an important assumption of functional magnetic resonance imaging (fMRI) group-level analysis. However, it is often violated in practice, even after alignment to a standard anatomical template. Hyperalignment, based on sequent …
Functional alignment between subjects is an important assumption of functional magnetic resonance imaging (fMRI) group-level analysis …
1,985 results