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19 results

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Page 1
A genomic catalog of Earth's microbiomes.
Nayfach S, Roux S, Seshadri R, Udwary D, Varghese N, Schulz F, Wu D, Paez-Espino D, Chen IM, Huntemann M, Palaniappan K, Ladau J, Mukherjee S, Reddy TBK, Nielsen T, Kirton E, Faria JP, Edirisinghe JN, Henry CS, Jungbluth SP, Chivian D, Dehal P, Wood-Charlson EM, Arkin AP, Tringe SG, Visel A; IMG/M Data Consortium; Woyke T, Mouncey NJ, Ivanova NN, Kyrpides NC, Eloe-Fadrosh EA. Nayfach S, et al. Nat Biotechnol. 2021 Apr;39(4):499-509. doi: 10.1038/s41587-020-0718-6. Epub 2020 Nov 9. Nat Biotechnol. 2021. PMID: 33169036 Free PMC article.
Prokaryotic-virus-encoded auxiliary metabolic genes throughout the global oceans.
Tian F, Wainaina JM, Howard-Varona C, Domínguez-Huerta G, Bolduc B, Gazitúa MC, Smith G, Gittrich MR, Zablocki O, Cronin DR, Eveillard D, Hallam SJ, Sullivan MB. Tian F, et al. Among authors: gazitua mc. Microbiome. 2024 Aug 29;12(1):159. doi: 10.1186/s40168-024-01876-z. Microbiome. 2024. PMID: 39198891 Free PMC article.
Genome-resolved viral ecology in a marine oxygen minimum zone.
Vik D, Gazitúa MC, Sun CL, Zayed AA, Aldunate M, Mulholland MR, Ulloa O, Sullivan MB. Vik D, et al. Among authors: gazitua mc. Environ Microbiol. 2021 Jun;23(6):2858-2874. doi: 10.1111/1462-2920.15313. Epub 2020 Nov 23. Environ Microbiol. 2021. PMID: 33185964
Glacier ice archives nearly 15,000-year-old microbes and phages.
Zhong ZP, Tian F, Roux S, Gazitúa MC, Solonenko NE, Li YF, Davis ME, Van Etten JL, Mosley-Thompson E, Rich VI, Sullivan MB, Thompson LG. Zhong ZP, et al. Among authors: gazitua mc. Microbiome. 2021 Jul 20;9(1):160. doi: 10.1186/s40168-021-01106-w. Microbiome. 2021. PMID: 34281625 Free PMC article.
Virus ecology and 7-year temporal dynamics across a permafrost thaw gradient.
Sun CL, Pratama AA, Gazitúa MC, Cronin D, McGivern BB, Wainaina JM, Vik DR, Zayed AA, Bolduc B; IsoGenie Project Field Teams 2010‐2017, the IsoGenie and EMERGE Projects Coordinators; Wrighton KC, Rich VI, Sullivan MB. Sun CL, et al. Among authors: gazitua mc. Environ Microbiol. 2024 Jul;26(8):e16665. doi: 10.1111/1462-2920.16665. Environ Microbiol. 2024. PMID: 39101434
DRAM for distilling microbial metabolism to automate the curation of microbiome function.
Shaffer M, Borton MA, McGivern BB, Zayed AA, La Rosa SL, Solden LM, Liu P, Narrowe AB, Rodríguez-Ramos J, Bolduc B, Gazitúa MC, Daly RA, Smith GJ, Vik DR, Pope PB, Sullivan MB, Roux S, Wrighton KC. Shaffer M, et al. Among authors: gazitua mc. Nucleic Acids Res. 2020 Sep 18;48(16):8883-8900. doi: 10.1093/nar/gkaa621. Nucleic Acids Res. 2020. PMID: 32766782 Free PMC article.
Fighting Fire with Fire: Phage Potential for the Treatment of E. coli O157 Infection.
Howard-Varona C, Vik DR, Solonenko NE, Li YF, Gazitua MC, Chittick L, Samiec JK, Jensen AE, Anderson P, Howard-Varona A, Kinkhabwala AA, Abedon ST, Sullivan MB. Howard-Varona C, et al. Among authors: gazitua mc. Antibiotics (Basel). 2018 Nov 16;7(4):101. doi: 10.3390/antibiotics7040101. Antibiotics (Basel). 2018. PMID: 30453470 Free PMC article.
19 results