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Page 1
Genome Sequence of Mycobacterium Phage CrystalP.
Fleischacker CL, Segura-Totten M; SEA-PHAGES 2016 Bioinformatics Workshop; Garlena RA, Jacobs-Sera D, Pope WH, Russell DA, Hatfull GF. Fleischacker CL, et al. Genome Announc. 2017 Jul 13;5(28):e00542-17. doi: 10.1128/genomeA.00542-17. Genome Announc. 2017. PMID: 28705967 Free PMC article.
Introduction to cotranscriptional RNA splicing.
Merkhofer EC, Hu P, Johnson TL. Merkhofer EC, et al. Methods Mol Biol. 2014;1126:83-96. doi: 10.1007/978-1-62703-980-2_6. Methods Mol Biol. 2014. PMID: 24549657 Free PMC article.
Instructional Models for Course-Based Research Experience (CRE) Teaching.
Hanauer DI, Graham MJ, Arnold RJ, Ayuk MA, Balish MF, Beyer AR, Butela KA, Byrum CA, Chia CP, Chung HM, Clase KL, Conant S, Coomans RJ, D'Elia T, Diaz J, Diaz A, Doty JA, Edgington NP, Edwards DC, Eivazova E, Emmons CB, Fast KM, Fisher EJ, Fleischacker CL, Frederick GD, Freise AC, Gainey MD, Gissendanner CR, Golebiewska UP, Guild NA, Hendrickson HL, Herren CD, Hopson-Fernandes MS, Hughes LE, Jacobs-Sera D, Johnson AA, Kirkpatrick BL, Klyczek KK, Koga AP, Kotturi H, LeBlanc-Straceski J, Lee-Soety JY, Leonard JE, Mastropaolo MD, Merkhofer EC, Michael SF, Mitchell JC, Mohan S, Monti DL, Noutsos C, Nsa IY, Peters NT, Plymale R, Pollenz RS, Porter ML, Rinehart CA, Rosas-Acosta G, Ross JF, Rubin MR, Scherer AE, Schroeder SC, Shaffer CD, Sprenkle AB, Sunnen CN, Swerdlow SJ, Tobiason D, Tolsma SS, Tsourkas PK, Ward RE, Ware VC, Warner MH, Washington JM, Westover KM, White SJ, Whitefleet-Smith JL, Williams DC, Wolyniak MJ, Zeilstra-Ryalls JH, Asai DJ, Hatfull GF, Sivanathan V. Hanauer DI, et al. Among authors: merkhofer ec. CBE Life Sci Educ. 2022 Mar;21(1):ar8. doi: 10.1187/cbe.21-03-0057. CBE Life Sci Educ. 2022. PMID: 34978921 Free PMC article.
Genomic diversity of bacteriophages infecting Microbacterium spp.
Jacobs-Sera D, Abad LA, Alvey RM, Anders KR, Aull HG, Bhalla SS, Blumer LS, Bollivar DW, Bonilla JA, Butela KA, Coomans RJ, Cresawn SG, D'Elia T, Diaz A, Divens AM, Edgington NP, Frederick GD, Gainey MD, Garlena RA, Grant KW, Gurney SMR, Hendrickson HL, Hughes LE, Kenna MA, Klyczek KK, Kotturi H, Mavrich TN, McKinney AL, Merkhofer EC, Moberg Parker J, Molloy SD, Monti DL, Pape-Zambito DA, Pollenz RS, Pope WH, Reyna NS, Rinehart CA, Russell DA, Shaffer CD, Sivanathan V, Stoner TH, Stukey J, Sunnen CN, Tolsma SS, Tsourkas PK, Wallen JR, Ware VC, Warner MH, Washington JM, Westover KM, Whitefleet-Smith JL, Wiersma-Koch HI, Williams DC, Zack KM, Hatfull GF. Jacobs-Sera D, et al. Among authors: merkhofer ec. PLoS One. 2020 Jun 18;15(6):e0234636. doi: 10.1371/journal.pone.0234636. eCollection 2020. PLoS One. 2020. PMID: 32555720 Free PMC article.
Student Attitudes Contribute to the Effectiveness of a Genomics CURE.
Lopatto D, Rosenwald AG, Burgess RC, Silver Key C, Van Stry M, Wawersik M, DiAngelo JR, Hark AT, Skerritt M, Allen AK, Alvarez C, Anderson S, Arrigo C, Arsham A, Barnard D, Bedard JEJ, Bose I, Braverman JM, Burg MG, Croonquist P, Du C, Dubowsky S, Eisler H, Escobar MA, Foulk M, Giarla T, Glaser RL, Goodman AL, Gosser Y, Haberman A, Hauser C, Hays S, Howell CE, Jemc J, Jones CJ, Kadlec L, Kagey JD, Keller KL, Kennell J, Kleinschmit AJ, Kleinschmit M, Kokan NP, Kopp OR, Laakso MM, Leatherman J, Long LJ, Manier M, Martinez-Cruzado JC, Matos LF, McClellan AJ, McNeil G, Merkhofer E, Mingo V, Mistry H, Mitchell E, Mortimer NT, Myka JL, Nagengast A, Overvoorde P, Paetkau D, Paliulis L, Parrish S, Toering Peters S, Preuss ML, Price JV, Pullen NA, Reinke C, Revie D, Robic S, Roecklein-Canfield JA, Rubin MR, Sadikot T, Sanford JS, Santisteban M, Saville K, Schroeder S, Shaffer CD, Sharif KA, Sklensky DE, Small C, Smith S, Spokony R, Sreenivasan A, Stamm J, Sterne-Marr R, Teeter KC, Thackeray J, Thompson JS, Velazquez-Ulloa N, Wolfe C, Youngblom J, Yowler B, Zhou L, Brennan J, Buhler J, Leung W, Elgin SCR, Reed LK. Lopatto D, et al. Among authors: merkhofer e. J Microbiol Biol Educ. 2022 May 16;23(2):e00208-21. doi: 10.1128/jmbe.00208-21. eCollection 2022 Aug. J Microbiol Biol Educ. 2022. PMID: 36061313 Free PMC article.
U1 snRNA rewrites the "script".
Merkhofer EC, Johnson TL. Merkhofer EC, et al. Cell. 2012 Jul 6;150(1):9-11. doi: 10.1016/j.cell.2012.06.017. Cell. 2012. PMID: 22770211 Free PMC article.
Facilitating Growth through Frustration: Using Genomics Research in a Course-Based Undergraduate Research Experience.
Lopatto D, Rosenwald AG, DiAngelo JR, Hark AT, Skerritt M, Wawersik M, Allen AK, Alvarez C, Anderson S, Arrigo C, Arsham A, Barnard D, Bazinet C, Bedard JEJ, Bose I, Braverman JM, Burg MG, Burgess RC, Croonquist P, Du C, Dubowsky S, Eisler H, Escobar MA, Foulk M, Furbee E, Giarla T, Glaser RL, Goodman AL, Gosser Y, Haberman A, Hauser C, Hays S, Howell CE, Jemc J, Johnson ML, Jones CJ, Kadlec L, Kagey JD, Keller KL, Kennell J, Key SCS, Kleinschmit AJ, Kleinschmit M, Kokan NP, Kopp OR, Laakso MM, Leatherman J, Long LJ, Manier M, Martinez-Cruzado JC, Matos LF, McClellan AJ, McNeil G, Merkhofer E, Mingo V, Mistry H, Mitchell E, Mortimer NT, Mukhopadhyay D, Myka JL, Nagengast A, Overvoorde P, Paetkau D, Paliulis L, Parrish S, Preuss ML, Price JV, Pullen NA, Reinke C, Revie D, Robic S, Roecklein-Canfield JA, Rubin MR, Sadikot T, Sanford JS, Santisteban M, Saville K, Schroeder S, Shaffer CD, Sharif KA, Sklensky DE, Small C, Smith M, Smith S, Spokony R, Sreenivasan A, Stamm J, Sterne-Marr R, Teeter KC, Thackeray J, Thompson JS, Peters ST, Van Stry M, Velazquez-Ulloa N, Wolfe C, Youngblom J, Yowler B, Zhou L, Brennan J, Buhler J, Leung W, Reed LK, Elgin SCR. Lopatto D, et al. Among authors: merkhofer e. J Microbiol Biol Educ. 2020 Feb 28;21(1):21.1.6. doi: 10.1128/jmbe.v21i1.2005. eCollection 2020. J Microbiol Biol Educ. 2020. PMID: 32148609 Free PMC article.
Supporting the democratization of science during a pandemic: genomics Course-based Undergraduate Research Experiences (CUREs) as an effective remote learning strategy.
Lopatto D, Silver Key SC, Van Stry M, Siders J, Leung W, Sandlin KM, Rele CP; Genomics Education Partnership; Reed LK. Lopatto D, et al. J Microbiol Biol Educ. 2023 Sep 22;24(3):e00039-23. doi: 10.1128/jmbe.00039-23. eCollection 2023 Dec. J Microbiol Biol Educ. 2023. PMID: 38230306 Free PMC article.
An inclusive Research Education Community (iREC): Impact of the SEA-PHAGES program on research outcomes and student learning.
Hanauer DI, Graham MJ; SEA-PHAGES; Betancur L, Bobrownicki A, Cresawn SG, Garlena RA, Jacobs-Sera D, Kaufmann N, Pope WH, Russell DA, Jacobs WR Jr, Sivanathan V, Asai DJ, Hatfull GF. Hanauer DI, et al. Proc Natl Acad Sci U S A. 2017 Dec 19;114(51):13531-13536. doi: 10.1073/pnas.1718188115. Epub 2017 Dec 5. Proc Natl Acad Sci U S A. 2017. PMID: 29208718 Free PMC article.
15 results