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173 results

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Page 1
Calibration of computational tools for missense variant pathogenicity classification and ClinGen recommendations for PP3/BP4 criteria.
Pejaver V, Byrne AB, Feng BJ, Pagel KA, Mooney SD, Karchin R, O'Donnell-Luria A, Harrison SM, Tavtigian SV, Greenblatt MS, Biesecker LG, Radivojac P, Brenner SE; ClinGen Sequence Variant Interpretation Working Group. Pejaver V, et al. Among authors: pagel ka. Am J Hum Genet. 2022 Dec 1;109(12):2163-2177. doi: 10.1016/j.ajhg.2022.10.013. Epub 2022 Nov 21. Am J Hum Genet. 2022. PMID: 36413997 Free PMC article.
Standards for the classification of pathogenicity of somatic variants in cancer (oncogenicity): Joint recommendations of Clinical Genome Resource (ClinGen), Cancer Genomics Consortium (CGC), and Variant Interpretation for Cancer Consortium (VICC).
Horak P, Griffith M, Danos AM, Pitel BA, Madhavan S, Liu X, Chow C, Williams H, Carmody L, Barrow-Laing L, Rieke D, Kreutzfeldt S, Stenzinger A, Tamborero D, Benary M, Rajagopal PS, Ida CM, Lesmana H, Satgunaseelan L, Merker JD, Tolstorukov MY, Campregher PV, Warner JL, Rao S, Natesan M, Shen H, Venstrom J, Roy S, Tao K, Kanagal-Shamanna R, Xu X, Ritter DI, Pagel K, Krysiak K, Dubuc A, Akkari YM, Li XS, Lee J, King I, Raca G, Wagner AH, Li MM, Plon SE, Kulkarni S, Griffith OL, Chakravarty D, Sonkin D. Horak P, et al. Among authors: pagel k. Genet Med. 2022 May;24(5):986-998. doi: 10.1016/j.gim.2022.01.001. Epub 2022 Jan 29. Genet Med. 2022. PMID: 35101336 Free PMC article.
State-of-the-art glycosaminoglycan characterization.
Zappe A, Miller RL, Struwe WB, Pagel K. Zappe A, et al. Among authors: pagel k. Mass Spectrom Rev. 2022 Nov;41(6):1040-1071. doi: 10.1002/mas.21737. Epub 2021 Oct 5. Mass Spectrom Rev. 2022. PMID: 34608657 Review.
Glycosaminoglycans: What Remains To Be Deciphered?
Perez S, Makshakova O, Angulo J, Bedini E, Bisio A, de Paz JL, Fadda E, Guerrini M, Hricovini M, Hricovini M, Lisacek F, Nieto PM, Pagel K, Paiardi G, Richter R, Samsonov SA, Vivès RR, Nikitovic D, Ricard Blum S. Perez S, et al. Among authors: pagel k. JACS Au. 2023 Mar 2;3(3):628-656. doi: 10.1021/jacsau.2c00569. eCollection 2023 Mar 27. JACS Au. 2023. PMID: 37006755 Free PMC article. Review.
Ion mobility-tandem mass spectrometry of mucin-type O-glycans.
Bechtella L, Chunsheng J, Fentker K, Ertürk GR, Safferthal M, Polewski Ł, Götze M, Graeber SY, Vos GM, Struwe WB, Mall MA, Mertins P, Karlsson NG, Pagel K. Bechtella L, et al. Among authors: pagel k. Nat Commun. 2024 Mar 23;15(1):2611. doi: 10.1038/s41467-024-46825-4. Nat Commun. 2024. PMID: 38521783 Free PMC article.
Glycan Analysis by Ion Mobility-Mass Spectrometry.
Hofmann J, Pagel K. Hofmann J, et al. Among authors: pagel k. Angew Chem Int Ed Engl. 2017 Jul 10;56(29):8342-8349. doi: 10.1002/anie.201701309. Epub 2017 Jun 7. Angew Chem Int Ed Engl. 2017. PMID: 28436597 Review.
Gas-phase infrared spectroscopy of glycans and glycoconjugates.
Greis K, Kirschbaum C, von Helden G, Pagel K. Greis K, et al. Among authors: pagel k. Curr Opin Struct Biol. 2022 Feb;72:194-202. doi: 10.1016/j.sbi.2021.11.006. Epub 2021 Dec 21. Curr Opin Struct Biol. 2022. PMID: 34952241 Review.
Advancing Solutions to the Carbohydrate Sequencing Challenge.
Gray CJ, Migas LG, Barran PE, Pagel K, Seeberger PH, Eyers CE, Boons GJ, Pohl NLB, Compagnon I, Widmalm G, Flitsch SL. Gray CJ, et al. Among authors: pagel k. J Am Chem Soc. 2019 Sep 18;141(37):14463-14479. doi: 10.1021/jacs.9b06406. Epub 2019 Aug 21. J Am Chem Soc. 2019. PMID: 31403778 Free PMC article. Review.
Non-ionic hybrid detergents for protein delipidation.
Urner LH, Liko I, Pagel K, Haag R, Robinson CV. Urner LH, et al. Among authors: pagel k. Biochim Biophys Acta Biomembr. 2022 Sep 1;1864(9):183958. doi: 10.1016/j.bbamem.2022.183958. Epub 2022 May 10. Biochim Biophys Acta Biomembr. 2022. PMID: 35551920 Free article.
Standards for the classification of pathogenicity of somatic variants in cancer (oncogenicity): Joint recommendations of Clinical Genome Resource (ClinGen), Cancer Genomics Consortium (CGC), and Variant Interpretation for Cancer Consortium (VICC).
Horak P, Griffith M, Danos AM, Pitel BA, Madhavan S, Liu X, Chow C, Williams H, Carmody L, Barrow-Laing L, Rieke D, Kreutzfeldt S, Stenzinger A, Tamborero D, Benary M, Rajagopal PS, Ida CM, Lesmana H, Satgunaseelan L, Merker JD, Tolstorukov MY, Campregher PV, Warner JL, Rao S, Natesan M, Shen H, Venstrom J, Roy S, Tao K, Kanagal-Shamanna R, Xu X, Ritter DI, Pagel K, Krysiak K, Dubuc A, Akkari YM, Li XS, Lee J, King I, Raca G, Wagner AH, Li MM, Plon SE, Kulkarni S, Griffith OL, Chakravarty D, Sonkin D. Horak P, et al. Among authors: pagel k. Genet Med. 2022 Sep;24(9):1991. doi: 10.1016/j.gim.2022.07.001. Genet Med. 2022. PMID: 36063163 Free article. No abstract available.
173 results