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Page 1
Epigenomic Diversity in a Global Collection of Arabidopsis thaliana Accessions.
Kawakatsu T, Huang SC, Jupe F, Sasaki E, Schmitz RJ, Urich MA, Castanon R, Nery JR, Barragan C, He Y, Chen H, Dubin M, Lee CR, Wang C, Bemm F, Becker C, O'Neil R, O'Malley RC, Quarless DX; 1001 Genomes Consortium; Schork NJ, Weigel D, Nordborg M, Ecker JR. Kawakatsu T, et al. Cell. 2016 Jul 14;166(2):492-505. doi: 10.1016/j.cell.2016.06.044. Cell. 2016. PMID: 27419873 Free PMC article.
Towards complete and error-free genome assemblies of all vertebrate species.
Rhie A, McCarthy SA, Fedrigo O, Damas J, Formenti G, Koren S, Uliano-Silva M, Chow W, Fungtammasan A, Kim J, Lee C, Ko BJ, Chaisson M, Gedman GL, Cantin LJ, Thibaud-Nissen F, Haggerty L, Bista I, Smith M, Haase B, Mountcastle J, Winkler S, Paez S, Howard J, Vernes SC, Lama TM, Grutzner F, Warren WC, Balakrishnan CN, Burt D, George JM, Biegler MT, Iorns D, Digby A, Eason D, Robertson B, Edwards T, Wilkinson M, Turner G, Meyer A, Kautt AF, Franchini P, Detrich HW 3rd, Svardal H, Wagner M, Naylor GJP, Pippel M, Malinsky M, Mooney M, Simbirsky M, Hannigan BT, Pesout T, Houck M, Misuraca A, Kingan SB, Hall R, Kronenberg Z, Sović I, Dunn C, Ning Z, Hastie A, Lee J, Selvaraj S, Green RE, Putnam NH, Gut I, Ghurye J, Garrison E, Sims Y, Collins J, Pelan S, Torrance J, Tracey A, Wood J, Dagnew RE, Guan D, London SE, Clayton DF, Mello CV, Friedrich SR, Lovell PV, Osipova E, Al-Ajli FO, Secomandi S, Kim H, Theofanopoulou C, Hiller M, Zhou Y, Harris RS, Makova KD, Medvedev P, Hoffman J, Masterson P, Clark K, Martin F, Howe K, Flicek P, Walenz BP, Kwak W, Clawson H, Diekhans M, Nassar L, Paten B, Kraus RHS, Crawford AJ, Gilbert MTP, Zhang G, Venkatesh B, Murphy RW, Koepfli KP, Shapiro B,… See abstract for full author list ➔ Rhie A, et al. Among authors: svardal h. Nature. 2021 Apr;592(7856):737-746. doi: 10.1038/s41586-021-03451-0. Epub 2021 Apr 28. Nature. 2021. PMID: 33911273 Free PMC article.
1,135 Genomes Reveal the Global Pattern of Polymorphism in Arabidopsis thaliana.
1001 Genomes Consortium. Electronic address: magnus.nordborg@gmi.oeaw.ac.at; 1001 Genomes Consortium. 1001 Genomes Consortium. Electronic address: magnus.nordborg@gmi.oeaw.ac.at, et al. Cell. 2016 Jul 14;166(2):481-491. doi: 10.1016/j.cell.2016.05.063. Epub 2016 Jun 9. Cell. 2016. PMID: 27293186 Free PMC article.
How genomics can help biodiversity conservation.
Theissinger K, Fernandes C, Formenti G, Bista I, Berg PR, Bleidorn C, Bombarely A, Crottini A, Gallo GR, Godoy JA, Jentoft S, Malukiewicz J, Mouton A, Oomen RA, Paez S, Palsbøll PJ, Pampoulie C, Ruiz-López MJ, Secomandi S, Svardal H, Theofanopoulou C, de Vries J, Waldvogel AM, Zhang G, Jarvis ED, Bálint M, Ciofi C, Waterhouse RM, Mazzoni CJ, Höglund J; European Reference Genome Atlas Consortium. Theissinger K, et al. Among authors: svardal h. Trends Genet. 2023 Jul;39(7):545-559. doi: 10.1016/j.tig.2023.01.005. Epub 2023 Feb 16. Trends Genet. 2023. PMID: 36801111 Free article. Review.
The era of reference genomes in conservation genomics.
Formenti G, Theissinger K, Fernandes C, Bista I, Bombarely A, Bleidorn C, Ciofi C, Crottini A, Godoy JA, Höglund J, Malukiewicz J, Mouton A, Oomen RA, Paez S, Palsbøll PJ, Pampoulie C, Ruiz-López MJ, Svardal H, Theofanopoulou C, de Vries J, Waldvogel AM, Zhang G, Mazzoni CJ, Jarvis ED, Bálint M; European Reference Genome Atlas (ERGA) Consortium. Formenti G, et al. Among authors: svardal h. Trends Ecol Evol. 2022 Mar;37(3):197-202. doi: 10.1016/j.tree.2021.11.008. Epub 2022 Jan 24. Trends Ecol Evol. 2022. PMID: 35086739 Free article.
Oil extraction imperils Africa's Great Lakes.
Verheyen E, Abila R, Akoll P, Albertson C, Antunes D, Banda T, Bills R, Bulirani A, Manda AC, Cohen AS, Cunha-Saraiva F, Derycke S, Donohue I, Du M, Dudu AM, Egger B, Fritzsche K, Frommen JG, Gante HF, Genner MJ, Härer A, Hata H, Irvine K, Mwapu PI, de Bisthoven LJ, Jungwirth A, Kaleme P, Katongo C, Kéver L, Koblmüller S, Konings A, Lamboj A, Lemmel-Schaedelin F, Schiaffino GM, Martens K, Mulungula PM, Meyer A, More HL, Musilova Z, Bukinga FM, Muzumani R, Ntakimazi G, Okello W, Phiri H, Pialek L, Plisnier PD, Raeymaekers JAM, Rajkov J, Rican O, Roberts R, Salzburger W, Schoen I, Sefc KM, Singh P, Skelton P, Snoeks J, Schneider K, Sturmbauer C, Svardal H, Svensson O, Dowdall JT, Turner GF, Tyers A, van Rijssel JC, Van Steenberge M, Vanhove MPM, Weber AT, Weyl O, Ziegelbecker A, Zimmermann H. Verheyen E, et al. Among authors: svardal h. Science. 2016 Nov 4;354(6312):561-562. doi: 10.1126/science.aal1722. Science. 2016. PMID: 27811261 No abstract available.
Genomic consequences of domestication of the Siamese fighting fish.
Kwon YM, Vranken N, Hoge C, Lichak MR, Norovich AL, Francis KX, Camacho-Garcia J, Bista I, Wood J, McCarthy S, Chow W, Tan HH, Howe K, Bandara S, von Lintig J, Rüber L, Durbin R, Svardal H, Bendesky A. Kwon YM, et al. Among authors: svardal h. Sci Adv. 2022 Mar 11;8(10):eabm4950. doi: 10.1126/sciadv.abm4950. Epub 2022 Mar 9. Sci Adv. 2022. PMID: 35263139 Free PMC article.
Evolutionary Genomics at the Human-Environment Interface in Africa.
Svardal H, Rusuwa B, Linderoth T, Kiran A, Charmantier A, Lattorff HMG, Cagan A, Ommeh SC, Kamng'ona A, Katongo C, Santos ME, Durbin R, Kumwenda B, Visscher PM, von der Heyden S; Participants of SMBE Malawi. Svardal H, et al. Mol Biol Evol. 2020 Oct 1;37(10):3076-3080. doi: 10.1093/molbev/msaa132. Mol Biol Evol. 2020. PMID: 32442309
Building a Portuguese coalition for biodiversity genomics.
Marques JP, Alves PC, Amorim IR, Lopes RJ, Moura M, Myers E, Sim-Sim M, Sousa-Santos C, Alves MJ, Borges PAV, Brown T, Carneiro M, Carrapato C, Ceríaco LMP, Ciofi C, da Silva LP, Diedericks G, Diroma MA, Farelo L, Formenti G, Gil F, Grilo M, Iannucci A, Leitão HG, Máguas C, Mc Cartney AM, Mendes SL, Moreno JM, Morselli M, Mouton A, Natali C, Pereira F, Rego RMC, Resendes R, Roxo G, Svardal H, Trindade H, Vicente S, Winkler S, Alvarenga M, Amaral AJ, Antunes A, Campos PF, Canário AVM, Castilho R, Castro LFC, Crottini A, Cunha MV, Espregueira Themudo G, Esteves PJ, Faria R, Rodríguez Fernandes C, Ledoux JB, Louro B, Magalhaes S, Paulo OS, Pearson G, Pimenta J, Pina-Martins F, Santos TL, Serrão E, Melo-Ferreira J, Sousa VC. Marques JP, et al. Among authors: svardal h. NPJ Biodivers. 2024 Sep 17;3(1):27. doi: 10.1038/s44185-024-00061-7. NPJ Biodivers. 2024. PMID: 39289491 Free PMC article.
33 results